Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AP000893.1-201ENST00000474462 794 ntBASIC3.43□□□□□ -1.86
RFC3P40938 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.43□□□□□ -1.86
RFC3P40938 OR9N1P-202ENST00000494289 481 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.43□□□□□ -1.86
RFC3P40938 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.43□□□□□ -1.86
RFC3P40938 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.43□□□□□ -1.86
RFC3P40938 RNU6-751P-201ENST00000516382 101 ntBASIC3.43□□□□□ -1.86
RFC3P40938 RN7SKP234-201ENST00000517173 224 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AC008562.1-201ENST00000521763 330 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFC3P40938 AP000619.3-201ENST00000535634 1127 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AC025260.1-201ENST00000548858 430 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.43□□□□□ -1.86
RFC3P40938 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.43□□□□□ -1.86
RFC3P40938 MIR3922-201ENST00000585192 84 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.43□□□□□ -1.86
RFC3P40938 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.43□□□□□ -1.86
RFC3P40938 RNA5SP108-201ENST00000605921 117 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AL592295.2-201ENST00000612578 206 ntBASIC3.43□□□□□ -1.86
RFC3P40938 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AC104820.1-201ENST00000624183 307 ntBASIC3.43□□□□□ -1.86
RFC3P40938 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.43□□□□□ -1.86
RFC3P40938 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RFC3P40938 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RFC3P40938 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFC3P40938 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.43□□□□□ -1.86
RFC3P40938 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
RFC3P40938 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.42□□□□□ -1.86
RFC3P40938 RNA5SP51-201ENST00000364750 119 ntBASIC3.42□□□□□ -1.86
RFC3P40938 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.42□□□□□ -1.86
RFC3P40938 SYF2P2-201ENST00000417620 583 ntBASIC3.42□□□□□ -1.86
RFC3P40938 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.42□□□□□ -1.86
RFC3P40938 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.42□□□□□ -1.86
RFC3P40938 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.42□□□□□ -1.86
RFC3P40938 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.42□□□□□ -1.86
RFC3P40938 KCTD9P3-201ENST00000434597 1169 ntBASIC3.42□□□□□ -1.86
RFC3P40938 SNORA71B-202ENST00000439232 272 ntBASIC3.42□□□□□ -1.86
RFC3P40938 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.42□□□□□ -1.86
RFC3P40938 AC114878.1-201ENST00000441166 358 ntBASIC3.42□□□□□ -1.86
RFC3P40938 AC097499.1-201ENST00000444277 208 ntBASIC3.42□□□□□ -1.86
RFC3P40938 SETD6P1-201ENST00000444575 317 ntBASIC3.42□□□□□ -1.86
RFC3P40938 PPIAP3-201ENST00000450588 505 ntBASIC3.42□□□□□ -1.86
RFC3P40938 HMGN2P7-201ENST00000456186 273 ntBASIC3.42□□□□□ -1.86
RFC3P40938 CEACAMP4-201ENST00000457676 421 ntBASIC3.42□□□□□ -1.86
RFC3P40938 snoU13.22-201ENST00000459428 104 ntBASIC3.42□□□□□ -1.86
RFC3P40938 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.42□□□□□ -1.86
RFC3P40938 SNX5P1-201ENST00000505757 1041 ntBASIC3.42□□□□□ -1.86
RFC3P40938 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.42□□□□□ -1.86
RFC3P40938 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.42□□□□□ -1.86
RFC3P40938 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.42□□□□□ -1.86
RFC3P40938 IGKV2D-19-201ENST00000523346 262 ntBASIC3.42□□□□□ -1.86
RFC3P40938 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.42□□□□□ -1.86
RFC3P40938 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.42□□□□□ -1.86
RFC3P40938 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.42□□□□□ -1.86
RFC3P40938 MTATP6P25-201ENST00000574491 261 ntBASIC3.42□□□□□ -1.86
RFC3P40938 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
RFC3P40938 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.42□□□□□ -1.86
RFC3P40938 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.42□□□□□ -1.86
RFC3P40938 AC015849.2-201ENST00000605738 409 ntBASIC3.42□□□□□ -1.86
RFC3P40938 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.42□□□□□ -1.86
RFC3P40938 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFC3P40938 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFC3P40938 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RFC3P40938 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFC3P40938 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFC3P40938 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFC3P40938 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
RFC3P40938 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 OTUD4P1-201ENST00000237841 3067 ntBASIC3.41□□□□□ -1.86
RFC3P40938 AC009501.3-201ENST00000605001 1352 ntBASIC3.41□□□□□ -1.86
RFC3P40938 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RFC3P40938 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 SNORA63.1-201ENST00000362493 131 ntBASIC3.41□□□□□ -1.86
RFC3P40938 SNORD46.1-201ENST00000364139 104 ntBASIC3.41□□□□□ -1.86
RFC3P40938 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 MIR142-201ENST00000384835 87 ntBASIC3.41□□□□□ -1.86
RFC3P40938 CRYBB2P1-203ENST00000415709 538 ntBASIC3.41□□□□□ -1.86
RFC3P40938 HSPD1P21-201ENST00000436541 245 ntBASIC3.41□□□□□ -1.86
RFC3P40938 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 RSL24D1P2-201ENST00000445584 366 ntBASIC3.41□□□□□ -1.86
RFC3P40938 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
RFC3P40938 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RFC3P40938 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.41□□□□□ -1.86
RFC3P40938 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms