Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL589765.3-201ENST00000446084 462 ntBASIC4.91□□□□□ -1.62
CLIP1P30622 AC133473.1-201ENST00000455173 299 ntBASIC4.91□□□□□ -1.62
CLIP1P30622 PRDX3P4-201ENST00000470828 747 ntBASIC4.91□□□□□ -1.62
CLIP1P30622 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP1P30622 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP1P30622 AL592295.2-201ENST00000612578 206 ntBASIC4.91□□□□□ -1.62
CLIP1P30622 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP1P30622 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP1P30622 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CLIP1P30622 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP1P30622 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP1P30622 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLIP1P30622 GTF2IP23-201ENST00000423746 351 ntBASIC4.9□□□□□ -1.62
CLIP1P30622 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.9□□□□□ -1.62
CLIP1P30622 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.9□□□□□ -1.62
CLIP1P30622 IGHV3-29-201ENST00000604817 344 ntBASIC4.9□□□□□ -1.62
CLIP1P30622 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.9□□□□□ -1.62
CLIP1P30622 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.9□□□□□ -1.62
CLIP1P30622 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLIP1P30622 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP1P30622 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP1P30622 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP1P30622 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.9□□□□□ -1.63
CLIP1P30622 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.9□□□□□ -1.63
CLIP1P30622 RPL7P26-201ENST00000333817 754 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 ANKRD36P1-201ENST00000344424 659 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.89□□□□□ -1.63
CLIP1P30622 RPS7P13-201ENST00000413955 498 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 RPS12P23-201ENST00000419579 400 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.89□□□□□ -1.63
CLIP1P30622 S100A11P1-201ENST00000477525 312 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 AC138409.2-202ENST00000507274 458 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.89□□□□□ -1.63
CLIP1P30622 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.89□□□□□ -1.63
CLIP1P30622 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLIP1P30622 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
CLIP1P30622 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLIP1P30622 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.89□□□□□ -1.63
CLIP1P30622 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLIP1P30622 SPATA2P1-201ENST00000431223 2055 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 RPL7P25-201ENST00000404151 721 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 AL353692.2-201ENST00000407054 335 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.89□□□□□ -1.63
CLIP1P30622 RPL37P4-201ENST00000448908 268 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 AC006539.3-201ENST00000454258 129 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.89□□□□□ -1.63
CLIP1P30622 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.89□□□□□ -1.63
CLIP1P30622 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.89□□□□□ -1.63
CLIP1P30622 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLIP1P30622 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CLIP1P30622 AC090971.4-201ENST00000560291 1800 ntBASIC4.88□□□□□ -1.63
CLIP1P30622 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.88□□□□□ -1.63
CLIP1P30622 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLIP1P30622 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.88□□□□□ -1.63
CLIP1P30622 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLIP1P30622 SNORA5B-201ENST00000363786 132 ntBASIC4.88□□□□□ -1.63
CLIP1P30622 SNORD15B-201ENST00000384714 146 ntBASIC4.88□□□□□ -1.63
CLIP1P30622 UBE2V1P2-201ENST00000397758 440 ntBASIC4.88□□□□□ -1.63
CLIP1P30622 AL445213.1-201ENST00000412589 747 ntBASIC4.88□□□□□ -1.63
CLIP1P30622 FAR1P1-201ENST00000427163 934 ntBASIC4.88□□□□□ -1.63
CLIP1P30622 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.88□□□□□ -1.63
CLIP1P30622 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.88□□□□□ -1.63
CLIP1P30622 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.88□□□□□ -1.63
CLIP1P30622 VWA8P1-201ENST00000510889 176 ntBASIC4.88□□□□□ -1.63
CLIP1P30622 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.88□□□□□ -1.63
CLIP1P30622 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.88□□□□□ -1.63
CLIP1P30622 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.88□□□□□ -1.63
CLIP1P30622 U7.8-201ENST00000619968 63 ntBASIC4.88□□□□□ -1.63
CLIP1P30622 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLIP1P30622 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CLIP1P30622 AL356489.2-201ENST00000566968 3528 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
CLIP1P30622 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CLIP1P30622 SKINT1L-201ENST00000401057 817 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 AL138878.1-201ENST00000405131 347 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.87□□□□□ -1.63
CLIP1P30622 RPL21P8-201ENST00000465083 535 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 OR5H3P-201ENST00000502817 919 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.87□□□□□ -1.63
CLIP1P30622 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP1P30622 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.87□□□□□ -1.63
CLIP1P30622 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.87□□□□□ -1.63
CLIP1P30622 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP1P30622 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.87□□□□□ -1.63
CLIP1P30622 MIR3124-201ENST00000582636 67 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 LINC00901.1-201ENST00000617252 152 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.87□□□□□ -1.63
CLIP1P30622 AL137790.1-201ENST00000634283 177 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.87□□□□□ -1.63
CLIP1P30622 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 MTND5P24-201ENST00000438892 1767 ntBASIC4.87□□□□□ -1.63
CLIP1P30622 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CLIP1P30622 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP1P30622 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP1P30622 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP1P30622 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP1P30622 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP1P30622 MIR22-201ENST00000362190 85 ntBASIC4.86□□□□□ -1.63
CLIP1P30622 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.86□□□□□ -1.63
CLIP1P30622 AC005002.1-201ENST00000447458 540 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms