Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RN7SL282P-201ENST00000479676 297 ntBASIC7.89□□□□□ -1.15
CD44P16070 RN7SL775P-201ENST00000498361 336 ntBASIC7.89□□□□□ -1.15
CD44P16070 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.89□□□□□ -1.15
CD44P16070 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.89□□□□□ -1.15
CD44P16070 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC7.89□□□□□ -1.15
CD44P16070 ATP5F1P5-201ENST00000526403 760 ntBASIC7.89□□□□□ -1.15
CD44P16070 DEFB131C-201ENST00000528817 165 ntBASIC7.89□□□□□ -1.15
CD44P16070 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.89□□□□□ -1.15
CD44P16070 NDUFA5P6-201ENST00000542110 379 ntBASIC7.89□□□□□ -1.15
CD44P16070 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.89□□□□□ -1.15
CD44P16070 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.89□□□□□ -1.15
CD44P16070 TRAV32-201ENST00000553993 340 ntBASIC7.89□□□□□ -1.15
CD44P16070 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC7.89□□□□□ -1.15
CD44P16070 FXNP1-201ENST00000555153 337 ntBASIC7.89□□□□□ -1.15
CD44P16070 AC243312.1-201ENST00000570582 275 ntBASIC7.89□□□□□ -1.15
CD44P16070 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.89□□□□□ -1.15
CD44P16070 AC008385.1-201ENST00000604421 355 ntBASIC7.89□□□□□ -1.15
CD44P16070 AC011603.4-201ENST00000611325 277 ntBASIC7.89□□□□□ -1.15
CD44P16070 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.89□□□□□ -1.15
CD44P16070 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 ZNF826P-207ENST00000622273 1910 ntBASIC7.89□□□□□ -1.15
CD44P16070 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.89□□□□□ -1.15
CD44P16070 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.89□□□□□ -1.15
CD44P16070 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.89□□□□□ -1.15
CD44P16070 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CD44P16070 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CD44P16070 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CD44P16070 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.88□□□□□ -1.15
CD44P16070 AC062029.1-202ENST00000606164 3651 ntBASIC7.88□□□□□ -1.15
CD44P16070 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CD44P16070 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CD44P16070 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CD44P16070 RPL10P16-201ENST00000325000 645 ntBASIC7.88□□□□□ -1.15
CD44P16070 RNA5SP301-201ENST00000362537 121 ntBASIC7.88□□□□□ -1.15
CD44P16070 RNU4-56P-201ENST00000364700 142 ntBASIC7.88□□□□□ -1.15
CD44P16070 RN7SKP269-201ENST00000365545 319 ntBASIC7.88□□□□□ -1.15
CD44P16070 SNORD15A-201ENST00000384214 148 ntBASIC7.88□□□□□ -1.15
CD44P16070 Y_RNA.525-201ENST00000384570 113 ntBASIC7.88□□□□□ -1.15
CD44P16070 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.88□□□□□ -1.15
CD44P16070 AL109941.1-201ENST00000401925 229 ntBASIC7.88□□□□□ -1.15
CD44P16070 RNU4-30P-201ENST00000410245 143 ntBASIC7.88□□□□□ -1.15
CD44P16070 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.88□□□□□ -1.15
CD44P16070 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.88□□□□□ -1.15
CD44P16070 AL358176.3-201ENST00000420757 454 ntBASIC7.88□□□□□ -1.15
CD44P16070 RPL23AP38-201ENST00000423801 469 ntBASIC7.88□□□□□ -1.15
CD44P16070 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.88□□□□□ -1.15
CD44P16070 RNU7-107P-201ENST00000459121 61 ntBASIC7.88□□□□□ -1.15
CD44P16070 RN7SL308P-201ENST00000464971 297 ntBASIC7.88□□□□□ -1.15
CD44P16070 AC133134.1-201ENST00000466800 359 ntBASIC7.88□□□□□ -1.15
CD44P16070 RPS14P8-201ENST00000478778 369 ntBASIC7.88□□□□□ -1.15
CD44P16070 HMGB3P3-201ENST00000510526 400 ntBASIC7.88□□□□□ -1.15
CD44P16070 CASP1P1-201ENST00000526345 212 ntBASIC7.88□□□□□ -1.15
CD44P16070 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.88□□□□□ -1.15
CD44P16070 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC7.88□□□□□ -1.15
CD44P16070 AC244034.2-201ENST00000562504 509 ntBASIC7.88□□□□□ -1.15
CD44P16070 RPSAP66-201ENST00000592196 606 ntBASIC7.88□□□□□ -1.15
CD44P16070 BDH2P1-201ENST00000602288 736 ntBASIC7.88□□□□□ -1.15
CD44P16070 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.88□□□□□ -1.15
CD44P16070 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CD44P16070 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.88□□□□□ -1.15
CD44P16070 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.88□□□□□ -1.15
CD44P16070 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CD44P16070 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.88□□□□□ -1.15
CD44P16070 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.88□□□□□ -1.15
CD44P16070 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CD44P16070 AC112255.1-201ENST00000624070 2493 ntBASIC7.88□□□□□ -1.15
CD44P16070 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CD44P16070 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.87□□□□□ -1.15
CD44P16070 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.87□□□□□ -1.15
CD44P16070 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.87□□□□□ -1.15
CD44P16070 LPAL2-203ENST00000454031 2498 ntBASIC7.87□□□□□ -1.15
CD44P16070 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CD44P16070 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 RNU6-37P-201ENST00000362692 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 Y_RNA.136-201ENST00000363444 102 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-11P-201ENST00000364234 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-7-201ENST00000364784 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 U8.6-201ENST00000364939 135 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-8-201ENST00000365467 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-25P-201ENST00000383873 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-1-201ENST00000383898 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-32P-201ENST00000383948 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-4P-201ENST00000384205 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-5P-201ENST00000384238 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-17P-201ENST00000384245 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-13P-201ENST00000384248 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-3P-201ENST00000384314 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-18P-201ENST00000384527 107 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms