Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.47□□□□□ -1.69
RB1P06400 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
RB1P06400 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.47□□□□□ -1.69
RB1P06400 MIR5708-201ENST00000579723 85 ntBASIC4.47□□□□□ -1.69
RB1P06400 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.47□□□□□ -1.69
RB1P06400 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.47□□□□□ -1.69
RB1P06400 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 AC010680.3-201ENST00000604215 520 ntBASIC4.47□□□□□ -1.69
RB1P06400 Z98200.1-201ENST00000607298 470 ntBASIC4.47□□□□□ -1.69
RB1P06400 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RB1P06400 AL354798.1-201ENST00000622505 329 ntBASIC4.47□□□□□ -1.69
RB1P06400 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RB1P06400 OR1S1-201ENST00000624470 978 ntBASIC4.47□□□□□ -1.69
RB1P06400 AC008013.2-202ENST00000637965 364 ntBASIC4.47□□□□□ -1.69
RB1P06400 ZNF663P-202ENST00000641770 1131 ntBASIC4.47□□□□□ -1.69
RB1P06400 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RB1P06400 MAPK10-303ENST00000641324 3959 ntBASIC4.47□□□□□ -1.69
RB1P06400 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RB1P06400 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.46□□□□□ -1.69
RB1P06400 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
RB1P06400 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
RB1P06400 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RB1P06400 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
RB1P06400 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.46□□□□□ -1.69
RB1P06400 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RB1P06400 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 PNPT1P2-201ENST00000456768 2050 ntBASIC4.46□□□□□ -1.7
RB1P06400 HMGB1P5-201ENST00000255320 642 ntBASIC4.46□□□□□ -1.7
RB1P06400 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 RNA5SP119-201ENST00000362715 117 ntBASIC4.46□□□□□ -1.7
RB1P06400 RNU6-839P-201ENST00000363347 108 ntBASIC4.46□□□□□ -1.7
RB1P06400 RNU6-707P-201ENST00000364647 95 ntBASIC4.46□□□□□ -1.7
RB1P06400 RNA5SP151-201ENST00000365632 117 ntBASIC4.46□□□□□ -1.7
RB1P06400 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RB1P06400 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 RNU6-444P-201ENST00000383988 108 ntBASIC4.46□□□□□ -1.7
RB1P06400 RNU2-21P-201ENST00000410368 188 ntBASIC4.46□□□□□ -1.7
RB1P06400 NUP35P2-201ENST00000416748 943 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC008280.1-201ENST00000418851 412 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 AC069157.1-201ENST00000421749 137 ntBASIC4.46□□□□□ -1.7
RB1P06400 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.46□□□□□ -1.7
RB1P06400 Z99714.1-201ENST00000450463 807 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC011352.3-201ENST00000505162 593 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.46□□□□□ -1.7
RB1P06400 AC006499.6-201ENST00000511169 607 ntBASIC4.46□□□□□ -1.7
RB1P06400 RNA5SP135-201ENST00000517019 125 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.46□□□□□ -1.7
RB1P06400 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 RPL21P7-201ENST00000557463 483 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.46□□□□□ -1.7
RB1P06400 AC022069.1-201ENST00000582910 658 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC067852.4-201ENST00000590314 478 ntBASIC4.46□□□□□ -1.7
RB1P06400 MTCO2P2-201ENST00000591258 225 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.46□□□□□ -1.7
RB1P06400 AL160290.3-201ENST00000604869 165 ntBASIC4.46□□□□□ -1.7
RB1P06400 RNU4-5P-201ENST00000607255 135 ntBASIC4.46□□□□□ -1.7
RB1P06400 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.46□□□□□ -1.7
RB1P06400 AC069200.1-201ENST00000609511 323 ntBASIC4.46□□□□□ -1.7
RB1P06400 MIR7151-201ENST00000617477 60 ntBASIC4.46□□□□□ -1.7
RB1P06400 AL121895.2-201ENST00000619558 447 ntBASIC4.46□□□□□ -1.7
RB1P06400 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.46□□□□□ -1.7
RB1P06400 AC009452.1-201ENST00000640823 606 ntBASIC4.46□□□□□ -1.7
RB1P06400 MFSD8-245ENST00000641743 948 ntBASIC4.46□□□□□ -1.7
RB1P06400 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.46□□□□□ -1.7
RB1P06400 EOGT-210ENST00000615922 1931 ntBASIC4.46□□□□□ -1.7
RB1P06400 AC105074.1-201ENST00000623380 3095 ntBASIC4.46□□□□□ -1.7
RB1P06400 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.46□□□□□ -1.7
RB1P06400 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.46□□□□□ -1.7
RB1P06400 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RB1P06400 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RB1P06400 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RB1P06400 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.45□□□□□ -1.7
RB1P06400 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RB1P06400 ZNF29P-201ENST00000225587 168 ntBASIC4.45□□□□□ -1.7
RB1P06400 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.45□□□□□ -1.7
RB1P06400 RNU6-213P-201ENST00000384051 104 ntBASIC4.45□□□□□ -1.7
RB1P06400 SNORD116-12-201ENST00000384468 92 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms