Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL1A1P02452 SNORD67-201ENST00000390833 111 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 OR6K4P-201ENST00000423179 955 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 RPL35AP12-201ENST00000425362 338 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.83□□□□□ -1.8
COL1A1P02452 AC005002.1-201ENST00000447458 540 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 AL591623.2-201ENST00000449978 222 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 AC087312.1-201ENST00000471411 480 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 RPS29P26-201ENST00000477483 171 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.83□□□□□ -1.8
COL1A1P02452 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.83□□□□□ -1.8
COL1A1P02452 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.83□□□□□ -1.8
COL1A1P02452 H3F3AP1-201ENST00000559984 334 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.83□□□□□ -1.8
COL1A1P02452 MIR4425-201ENST00000580572 84 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 MIR3945-201ENST00000581853 98 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 BNIP3P10-201ENST00000605360 577 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 AC110801.1-201ENST00000623590 212 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.83□□□□□ -1.8
COL1A1P02452 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
COL1A1P02452 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL1A1P02452 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL1A1P02452 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL1A1P02452 SAGE4P-201ENST00000442271 3381 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL1A1P02452 RIOK3P1-201ENST00000418778 1528 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.82□□□□□ -1.8
COL1A1P02452 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL1A1P02452 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.82□□□□□ -1.8
COL1A1P02452 MIR423-201ENST00000362201 94 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 SNORA5B-201ENST00000363786 132 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 AC127526.1-201ENST00000417526 366 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 AP000936.3-201ENST00000438127 255 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.82□□□□□ -1.8
COL1A1P02452 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
COL1A1P02452 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL1A1P02452 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.82□□□□□ -1.8
COL1A1P02452 ELOCP23-201ENST00000452014 332 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 RPL12P26-201ENST00000452430 487 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 CCDC75P1-201ENST00000469247 791 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.82□□□□□ -1.8
COL1A1P02452 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL1A1P02452 RNU1-143P-201ENST00000516296 146 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.82□□□□□ -1.8
COL1A1P02452 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.82□□□□□ -1.8
COL1A1P02452 AC011602.1-201ENST00000546484 331 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.82□□□□□ -1.8
COL1A1P02452 AL358913.1-201ENST00000554342 121 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.82□□□□□ -1.8
COL1A1P02452 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.82□□□□□ -1.8
COL1A1P02452 AC015849.2-201ENST00000605738 409 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 U1.23-201ENST00000610293 146 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 RNU1-68P-201ENST00000615382 146 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.82□□□□□ -1.8
COL1A1P02452 U1.39-201ENST00000621562 146 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
COL1A1P02452 HSPA8P1-201ENST00000425843 1833 ntBASIC3.82□□□□□ -1.8
COL1A1P02452 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.82□□□□□ -1.8
COL1A1P02452 AL356489.2-201ENST00000566968 3528 ntBASIC3.81□□□□□ -1.8
COL1A1P02452 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.81□□□□□ -1.8
COL1A1P02452 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL1A1P02452 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.81□□□□□ -1.8
COL1A1P02452 RNA5SP80-201ENST00000410475 111 ntBASIC3.81□□□□□ -1.8
COL1A1P02452 RANP4-201ENST00000413361 655 ntBASIC3.81□□□□□ -1.8
COL1A1P02452 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.81□□□□□ -1.8
COL1A1P02452 AL139281.1-201ENST00000422120 335 ntBASIC3.81□□□□□ -1.8
COL1A1P02452 GLRXP1-201ENST00000423261 334 ntBASIC3.81□□□□□ -1.8
COL1A1P02452 SETP10-201ENST00000424368 814 ntBASIC3.81□□□□□ -1.8
COL1A1P02452 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.81□□□□□ -1.8
COL1A1P02452 AC133473.1-201ENST00000455173 299 ntBASIC3.81□□□□□ -1.8
COL1A1P02452 AC068724.1-201ENST00000487100 792 ntBASIC3.81□□□□□ -1.8
COL1A1P02452 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.81□□□□□ -1.8
COL1A1P02452 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.81□□□□□ -1.8
COL1A1P02452 TGIF1P1-201ENST00000558095 802 ntBASIC3.81□□□□□ -1.8
COL1A1P02452 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.81□□□□□ -1.8
COL1A1P02452 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.81□□□□□ -1.8
COL1A1P02452 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.81□□□□□ -1.8
COL1A1P02452 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.81□□□□□ -1.8
COL1A1P02452 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.81□□□□□ -1.8
COL1A1P02452 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL1A1P02452 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.81□□□□□ -1.8
COL1A1P02452 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.81□□□□□ -1.8
COL1A1P02452 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.81□□□□□ -1.8
COL1A1P02452 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.81□□□□□ -1.8
COL1A1P02452 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL1A1P02452 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL1A1P02452 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL1A1P02452 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.8□□□□□ -1.8
COL1A1P02452 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 AL139132.1-201ENST00000431587 344 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 BX679664.1-201ENST00000434429 253 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 SETP5-201ENST00000437270 562 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 PPIAP17-201ENST00000438507 471 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 AC016696.1-201ENST00000446949 318 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 AC002553.2-201ENST00000453217 340 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 AC010401.1-201ENST00000463867 348 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 S100A11P1-201ENST00000477525 312 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 AC010374.2-201ENST00000512933 535 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.8□□□□□ -1.8
COL1A1P02452 MIR3162-201ENST00000581818 82 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms