Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.04□□□□□ -1.76
PDGFBP01127 DHX9P1-201ENST00000436565 3076 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDGFBP01127 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 BTBD10P2-201ENST00000404779 676 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 RPL23AP48-201ENST00000406913 488 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 AL158050.1-201ENST00000416077 457 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 AL158156.1-201ENST00000422509 473 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.04□□□□□ -1.76
PDGFBP01127 UBE2V1P1-201ENST00000430836 445 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 RPL21P110-201ENST00000433345 446 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFBP01127 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 RPL23AP15-201ENST00000450202 459 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 DNAJC19P8-201ENST00000452887 259 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.04□□□□□ -1.76
PDGFBP01127 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.04□□□□□ -1.76
PDGFBP01127 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFBP01127 HMGB3P30-201ENST00000457863 606 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 AL133162.1-201ENST00000463228 453 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFBP01127 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.04□□□□□ -1.76
PDGFBP01127 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFBP01127 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.04□□□□□ -1.76
PDGFBP01127 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 OR6C73P-201ENST00000546432 358 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 YPEL5P3-201ENST00000547227 352 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.04□□□□□ -1.76
PDGFBP01127 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFBP01127 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.04□□□□□ -1.76
PDGFBP01127 MIR432-201ENST00000606207 94 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 AL109659.3-201ENST00000624985 950 ntBASIC4.04□□□□□ -1.76
PDGFBP01127 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.04□□□□□ -1.76
PDGFBP01127 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFBP01127 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.04□□□□□ -1.76
PDGFBP01127 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFBP01127 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
PDGFBP01127 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PDGFBP01127 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PDGFBP01127 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFBP01127 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFBP01127 MTCO1P24-201ENST00000515438 1558 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFBP01127 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFBP01127 RNA5SP502-201ENST00000362694 119 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 RNU6-609P-201ENST00000365459 107 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
PDGFBP01127 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PDGFBP01127 AL603766.1-201ENST00000407763 664 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFBP01127 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AL591419.1-201ENST00000427423 339 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AL513175.1-201ENST00000431492 780 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 MTCO1P43-201ENST00000431831 488 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 USP9YP7-201ENST00000436723 430 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFBP01127 USP9YP32-201ENST00000452432 430 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFBP01127 AC133473.1-201ENST00000455173 299 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AL445433.1-201ENST00000457507 257 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 RPL32P14-201ENST00000463196 378 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 RPL21P71-201ENST00000465598 459 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.03□□□□□ -1.76
PDGFBP01127 RPS3AP6-201ENST00000484430 795 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 RPL29P14-201ENST00000495837 428 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFBP01127 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFBP01127 AC093755.1-201ENST00000512950 1023 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 HMGB1P1-201ENST00000522557 636 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC007458.1-201ENST00000542812 373 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AP003717.3-201ENST00000544832 1180 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC091516.1-201ENST00000549191 703 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFBP01127 AL133445.2-201ENST00000611191 527 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC026368.1-201ENST00000614934 690 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC090246.1-201ENST00000616499 426 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 AC107081.3-201ENST00000612715 2034 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFBP01127 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFBP01127 MAPK10-372ENST00000641954 3413 ntBASIC4.03□□□□□ -1.76
PDGFBP01127 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PDGFBP01127 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.03□□□□□ -1.77
PDGFBP01127 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.03□□□□□ -1.77
PDGFBP01127 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
PDGFBP01127 AC090337.1-201ENST00000579651 2074 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 MTND5P28-201ENST00000438005 1594 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 EOGT-210ENST00000615922 1931 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms