Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPL37P4-201ENST00000448908 268 ntBASIC1.41□□□□□ -2.18
USH2AO75445 NECAP1P2-201ENST00000455668 727 ntBASIC1.41□□□□□ -2.18
USH2AO75445 snoU13.18-201ENST00000459483 104 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.41□□□□□ -2.18
USH2AO75445 AL359219.2-201ENST00000555184 348 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AC027176.1-201ENST00000560204 514 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC1.41□□□□□ -2.18
USH2AO75445 AC068020.1-201ENST00000594215 661 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AC024153.1-201ENST00000603103 365 ntBASIC1.41□□□□□ -2.18
USH2AO75445 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
USH2AO75445 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
USH2AO75445 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.4□□□□□ -2.18
USH2AO75445 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
USH2AO75445 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.4□□□□□ -2.18
USH2AO75445 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
USH2AO75445 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.4□□□□□ -2.18
USH2AO75445 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.18
USH2AO75445 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
USH2AO75445 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
USH2AO75445 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
USH2AO75445 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
USH2AO75445 RPS20P1-201ENST00000434853 354 ntBASIC1.4□□□□□ -2.18
USH2AO75445 B3GNT2P1-201ENST00000434960 952 ntBASIC1.4□□□□□ -2.18
USH2AO75445 AC092436.1-201ENST00000506450 503 ntBASIC1.4□□□□□ -2.18
USH2AO75445 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC1.4□□□□□ -2.18
USH2AO75445 AC020895.1-201ENST00000595362 272 ntBASIC1.4□□□□□ -2.18
USH2AO75445 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.4□□□□□ -2.18
USH2AO75445 uc_338.1-201ENST00000612113 180 ntBASIC1.4□□□□□ -2.18
USH2AO75445 ALG13-230ENST00000623189 458 ntTSL 3 BASIC1.4□□□□□ -2.18
USH2AO75445 PISRT1-201ENST00000626175 531 ntBASIC1.4□□□□□ -2.18
USH2AO75445 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
USH2AO75445 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
USH2AO75445 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
USH2AO75445 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
USH2AO75445 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC1.4□□□□□ -2.19
USH2AO75445 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
USH2AO75445 Y_RNA.140-201ENST00000363474 103 ntBASIC1.4□□□□□ -2.19
USH2AO75445 SNORA71.1-201ENST00000364523 117 ntBASIC1.4□□□□□ -2.19
USH2AO75445 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.4□□□□□ -2.19
USH2AO75445 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.4□□□□□ -2.19
USH2AO75445 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC1.4□□□□□ -2.19
USH2AO75445 GEMIN8P3-201ENST00000445417 720 ntBASIC1.4□□□□□ -2.19
USH2AO75445 AC092045.1-201ENST00000495716 1231 ntBASIC1.4□□□□□ -2.19
USH2AO75445 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC1.4□□□□□ -2.19
USH2AO75445 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.4□□□□□ -2.19
USH2AO75445 DNAJC19P3-201ENST00000594491 331 ntBASIC1.4□□□□□ -2.19
USH2AO75445 AL031658.2-201ENST00000616850 651 ntBASIC1.4□□□□□ -2.19
USH2AO75445 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
USH2AO75445 LINC02471-203ENST00000641941 4752 ntBASIC1.4□□□□□ -2.19
USH2AO75445 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
USH2AO75445 AP000432.2-201ENST00000624164 2048 ntBASIC1.4□□□□□ -2.19
USH2AO75445 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
USH2AO75445 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
USH2AO75445 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
USH2AO75445 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.4□□□□□ -2.19
USH2AO75445 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
USH2AO75445 AC073325.2-201ENST00000339545 159 ntBASIC1.4□□□□□ -2.19
USH2AO75445 RNU6-76P-201ENST00000384060 104 ntBASIC1.4□□□□□ -2.19
USH2AO75445 HDGFP1-201ENST00000405943 252 ntBASIC1.4□□□□□ -2.19
USH2AO75445 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC1.4□□□□□ -2.19
USH2AO75445 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC1.4□□□□□ -2.19
USH2AO75445 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
USH2AO75445 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
USH2AO75445 ZNF658B-202ENST00000615961 3375 ntBASIC1.4□□□□□ -2.19
USH2AO75445 RNU1-15P-201ENST00000353977 144 ntBASIC1.4□□□□□ -2.19
USH2AO75445 Z98742.3-201ENST00000418637 326 ntBASIC1.4□□□□□ -2.19
USH2AO75445 AL645937.1-202ENST00000421799 937 ntBASIC1.4□□□□□ -2.19
USH2AO75445 DUTP6-201ENST00000425573 462 ntBASIC1.4□□□□□ -2.19
USH2AO75445 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
USH2AO75445 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC1.4□□□□□ -2.19
USH2AO75445 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.4□□□□□ -2.19
USH2AO75445 AC090695.1-201ENST00000561269 1222 ntBASIC1.4□□□□□ -2.19
USH2AO75445 CYP4A43P-201ENST00000568156 121 ntBASIC1.4□□□□□ -2.19
USH2AO75445 AC108206.1-201ENST00000570186 4159 ntBASIC1.4□□□□□ -2.19
USH2AO75445 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC1.4□□□□□ -2.19
USH2AO75445 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC1.4□□□□□ -2.19
USH2AO75445 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
USH2AO75445 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
USH2AO75445 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 RNA5SP68-201ENST00000363885 119 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AC098824.1-201ENST00000453565 980 ntBASIC1.39□□□□□ -2.19
USH2AO75445 ATP6V1G1P6-201ENST00000504007 334 ntBASIC1.39□□□□□ -2.19
USH2AO75445 HIGD1AP13-201ENST00000509878 289 ntBASIC1.39□□□□□ -2.19
USH2AO75445 TCP11X3P-202ENST00000514289 1254 ntBASIC1.39□□□□□ -2.19
USH2AO75445 RNA5SP116-201ENST00000516132 98 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AP003122.3-201ENST00000526316 255 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC1.39□□□□□ -2.19
USH2AO75445 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
USH2AO75445 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
USH2AO75445 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC1.39□□□□□ -2.19
USH2AO75445 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
USH2AO75445 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 RNVU1-3-201ENST00000364313 161 ntBASIC1.39□□□□□ -2.19
USH2AO75445 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
USH2AO75445 RNA5SP508-201ENST00000411327 119 ntBASIC1.39□□□□□ -2.19
USH2AO75445 POLR2J4-204ENST00000418424 324 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms