Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 HNRNPKP5-201ENST00000515300 253 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AC022447.1-201ENST00000515358 464 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 MTND1P5-201ENST00000517906 940 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AC134698.5-201ENST00000519444 336 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.93□□□□□ -1.78
LMX1BO60663 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.93□□□□□ -1.78
LMX1BO60663 HIGD1AP10-201ENST00000527837 282 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AC005832.3-201ENST00000537929 631 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.93□□□□□ -1.78
LMX1BO60663 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LMX1BO60663 AC079171.1-201ENST00000568788 914 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.93□□□□□ -1.78
LMX1BO60663 KPNA2P3-201ENST00000584190 848 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 VN1R88P-201ENST00000596787 292 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 EIF1P6-201ENST00000600054 334 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AL592221.1-201ENST00000605266 382 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.93□□□□□ -1.78
LMX1BO60663 AC092354.2-201ENST00000607786 514 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AC131235.4-201ENST00000609288 620 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AP000254.1-201ENST00000609934 520 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LMX1BO60663 AC121761.2-201ENST00000617300 689 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AL607023.1-201ENST00000620045 248 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LMX1BO60663 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
LMX1BO60663 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.93□□□□□ -1.78
LMX1BO60663 AC092656.1-203ENST00000624134 423 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.93□□□□□ -1.78
LMX1BO60663 AC139769.1-204ENST00000472297 1931 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
LMX1BO60663 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.93□□□□□ -1.78
LMX1BO60663 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LMX1BO60663 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.93□□□□□ -1.78
LMX1BO60663 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.93□□□□□ -1.78
LMX1BO60663 AC109315.1-201ENST00000584143 1347 ntBASIC3.93□□□□□ -1.78
LMX1BO60663 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.93□□□□□ -1.78
LMX1BO60663 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LMX1BO60663 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LMX1BO60663 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMX1BO60663 MTND4P34-201ENST00000572715 1371 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMX1BO60663 AC027290.2-201ENST00000623210 18662 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 SNORA71.2-201ENST00000364941 134 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 MIR217-201ENST00000384817 110 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 MIR659-201ENST00000384963 97 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 SNORA26.8-201ENST00000391306 124 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
LMX1BO60663 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LMX1BO60663 RN7SKP222-201ENST00000410651 315 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 RNA5SP146-201ENST00000410743 123 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 RNU6-920P-201ENST00000410926 92 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 RPL21P108-201ENST00000413857 481 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC114814.2-201ENST00000419195 485 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 RPEP3-201ENST00000425462 676 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 IFNNP1-201ENST00000429219 553 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 HMGB3P10-201ENST00000434734 572 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 TMX2P1-201ENST00000436507 708 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 USP9YP22-201ENST00000438971 294 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AL450263.2-201ENST00000439400 589 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.92□□□□□ -1.78
LMX1BO60663 MTCO1P19-201ENST00000443487 500 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC011276.1-201ENST00000469688 323 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 ACTG1P13-201ENST00000486987 1043 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC108022.1-201ENST00000493466 478 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC092045.1-201ENST00000495716 1231 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.92□□□□□ -1.78
LMX1BO60663 AC093824.1-201ENST00000508796 343 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 LTV1P1-201ENST00000510683 1237 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC015795.1-201ENST00000513669 327 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 RN7SKP31-201ENST00000516354 278 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 NPM1P6-201ENST00000521088 871 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC100770.1-201ENST00000532310 322 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AL121766.1-201ENST00000547436 487 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 AL109766.1-201ENST00000555080 552 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.92□□□□□ -1.78
LMX1BO60663 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.92□□□□□ -1.78
LMX1BO60663 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 RN7SL176P-201ENST00000580352 264 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.92□□□□□ -1.78
LMX1BO60663 AC073544.2-201ENST00000601155 540 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AF131215.7-201ENST00000602443 707 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC078795.2-201ENST00000602835 1252 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC008083.4-201ENST00000615076 444 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC009509.4-201ENST00000619202 509 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AP005019.3-201ENST00000620418 560 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AP003072.4-201ENST00000624580 310 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC116618.1-201ENST00000634617 774 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 OR2L1P-202ENST00000641567 1023 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 MTND5P29-201ENST00000458676 1807 ntBASIC3.92□□□□□ -1.78
LMX1BO60663 AC093536.2-201ENST00000565257 1406 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms