Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPL21P109-201ENST00000422213 475 ntBASIC3.25□□□□□ -1.89
SGCEO43556 AL139247.1-201ENST00000422768 325 ntBASIC3.25□□□□□ -1.89
SGCEO43556 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.25□□□□□ -1.89
SGCEO43556 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.25□□□□□ -1.89
SGCEO43556 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.25□□□□□ -1.89
SGCEO43556 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.25□□□□□ -1.89
SGCEO43556 AC006539.3-201ENST00000454258 129 ntBASIC3.25□□□□□ -1.89
SGCEO43556 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.25□□□□□ -1.89
SGCEO43556 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.25□□□□□ -1.89
SGCEO43556 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.25□□□□□ -1.89
SGCEO43556 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.25□□□□□ -1.89
SGCEO43556 AC068587.1-201ENST00000483613 781 ntBASIC3.25□□□□□ -1.89
SGCEO43556 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.25□□□□□ -1.89
SGCEO43556 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.25□□□□□ -1.89
SGCEO43556 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.25□□□□□ -1.89
SGCEO43556 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.25□□□□□ -1.89
SGCEO43556 OR7E13P-201ENST00000526052 910 ntBASIC3.25□□□□□ -1.89
SGCEO43556 EIF1AXP2-201ENST00000555940 413 ntBASIC3.25□□□□□ -1.89
SGCEO43556 AL121576.1-201ENST00000556055 276 ntBASIC3.25□□□□□ -1.89
SGCEO43556 CYP2C60P-201ENST00000566088 139 ntBASIC3.25□□□□□ -1.89
SGCEO43556 MIR5685-201ENST00000579080 79 ntBASIC3.25□□□□□ -1.89
SGCEO43556 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.25□□□□□ -1.89
SGCEO43556 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 AC090425.2-201ENST00000608818 501 ntBASIC3.25□□□□□ -1.89
SGCEO43556 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.25□□□□□ -1.89
SGCEO43556 AC026951.1-201ENST00000559530 2459 ntBASIC3.25□□□□□ -1.89
SGCEO43556 MTCO1P8-201ENST00000416914 1523 ntBASIC3.24□□□□□ -1.89
SGCEO43556 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SGCEO43556 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SGCEO43556 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SGCEO43556 RN7SKP156-201ENST00000410308 342 ntBASIC3.24□□□□□ -1.89
SGCEO43556 RPL31P2-201ENST00000413849 377 ntBASIC3.24□□□□□ -1.89
SGCEO43556 TCEA1P4-201ENST00000415066 844 ntBASIC3.24□□□□□ -1.89
SGCEO43556 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.24□□□□□ -1.89
SGCEO43556 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.24□□□□□ -1.89
SGCEO43556 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.24□□□□□ -1.89
SGCEO43556 RPL21P112-201ENST00000434403 463 ntBASIC3.24□□□□□ -1.89
SGCEO43556 HMGB1P45-201ENST00000435986 653 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AL606490.8-201ENST00000441624 319 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.24□□□□□ -1.89
SGCEO43556 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.24□□□□□ -1.89
SGCEO43556 AC021146.5-201ENST00000503544 545 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.24□□□□□ -1.89
SGCEO43556 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.24□□□□□ -1.89
SGCEO43556 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.24□□□□□ -1.89
SGCEO43556 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.24□□□□□ -1.89
SGCEO43556 AC093853.1-201ENST00000515689 483 ntBASIC3.24□□□□□ -1.89
SGCEO43556 RN7SKP21-201ENST00000516503 220 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AC008676.3-201ENST00000521237 435 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AC008562.1-201ENST00000521763 330 ntBASIC3.24□□□□□ -1.89
SGCEO43556 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.24□□□□□ -1.89
SGCEO43556 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.24□□□□□ -1.89
SGCEO43556 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.24□□□□□ -1.89
SGCEO43556 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.24□□□□□ -1.89
SGCEO43556 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.24□□□□□ -1.89
SGCEO43556 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.24□□□□□ -1.89
SGCEO43556 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.24□□□□□ -1.89
SGCEO43556 HSPE1P5-201ENST00000561489 272 ntBASIC3.24□□□□□ -1.89
SGCEO43556 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.24□□□□□ -1.89
SGCEO43556 MIR3160-1-201ENST00000577972 85 ntBASIC3.24□□□□□ -1.89
SGCEO43556 MIR5187-201ENST00000583479 76 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.24□□□□□ -1.89
SGCEO43556 VN1R85P-201ENST00000601587 426 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.24□□□□□ -1.89
SGCEO43556 AC005229.3-201ENST00000603438 323 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AC024023.1-201ENST00000624530 922 ntBASIC3.24□□□□□ -1.89
SGCEO43556 AP000553.6-201ENST00000641242 118 ntBASIC3.24□□□□□ -1.89
SGCEO43556 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SGCEO43556 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.24□□□□□ -1.89
SGCEO43556 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SGCEO43556 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SGCEO43556 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SGCEO43556 PWAR6-201ENST00000552334 4618 ntBASIC3.23□□□□□ -1.89
SGCEO43556 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SGCEO43556 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.23□□□□□ -1.89
SGCEO43556 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.23□□□□□ -1.89
SGCEO43556 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SGCEO43556 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.23□□□□□ -1.89
SGCEO43556 MIR607-201ENST00000385241 96 ntBASIC3.23□□□□□ -1.89
SGCEO43556 AL355379.1-201ENST00000405542 640 ntBASIC3.23□□□□□ -1.89
SGCEO43556 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.23□□□□□ -1.89
SGCEO43556 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
SGCEO43556 RNU2-21P-201ENST00000410368 188 ntBASIC3.23□□□□□ -1.89
SGCEO43556 SNORA57.3-201ENST00000411095 141 ntBASIC3.23□□□□□ -1.89
SGCEO43556 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SGCEO43556 SKP1P1-201ENST00000438081 489 ntBASIC3.23□□□□□ -1.89
SGCEO43556 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.23□□□□□ -1.89
SGCEO43556 RPS29P31-201ENST00000446147 164 ntBASIC3.23□□□□□ -1.89
SGCEO43556 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.23□□□□□ -1.89
SGCEO43556 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.23□□□□□ -1.89
SGCEO43556 AC010655.1-201ENST00000449336 292 ntBASIC3.23□□□□□ -1.89
SGCEO43556 BX276092.4-201ENST00000452056 248 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms