Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC138701.1-201ENST00000524329 714 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC023161.2-201ENST00000551218 780 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 NBEAP1-201ENST00000554452 979 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC084783.1-201ENST00000565846 910 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AL031985.2-201ENST00000600955 480 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 HNRNPDLP4-201ENST00000605144 301 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 SNORA62.6-201ENST00000606322 83 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC090948.1-201ENST00000607464 549 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 U1.23-201ENST00000610293 146 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 RNU1-68P-201ENST00000615382 146 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 CYCSP41-201ENST00000616920 296 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 U1.39-201ENST00000621562 146 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 MIR6813-201ENST00000621638 56 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 CD36-221ENST00000534394 1741 ntTSL 2 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AC240504.1-201ENST00000395709 845 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 RPS16P5-201ENST00000406501 404 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 METTL5-204ENST00000409340 472 ntTSL 5 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 RBMY2KP-201ENST00000418221 992 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 VN1R3-201ENST00000418822 919 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 HMGN2P30-201ENST00000423237 256 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 PTP4A1P3-201ENST00000433661 420 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 KCTD10P1-201ENST00000434203 625 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 FTH1P16-201ENST00000435241 552 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL12P11-201ENST00000439970 501 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL590399.6-201ENST00000446396 307 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL513343.1-201ENST00000451818 792 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 Z95152.1-201ENST00000453556 656 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 RPS29P12-201ENST00000460178 152 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SL594P-201ENST00000470590 287 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL12P20-201ENST00000475538 479 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL024509.2-201ENST00000493462 493 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SL612P-201ENST00000497704 295 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 SNORA31.1-201ENST00000515993 133 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 SNORA31.5-201ENST00000516190 133 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 CIR1P1-201ENST00000524055 1133 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 OR4R1P-201ENST00000529879 463 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 LYZ-203ENST00000549690 669 ntTSL 2 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 UBE2FP2-201ENST00000566646 462 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 SNORD95-201ENST00000579879 68 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AC068790.7-201ENST00000602347 528 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL12P50-201ENST00000603116 116 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 IGKV1OR2-118-201ENST00000603238 347 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL591034.3-201ENST00000605511 685 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AL391834.1-201ENST00000609609 560 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AC091903.1-201ENST00000624322 454 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AC004808.2-201ENST00000627965 773 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 FO624990.1-201ENST00000636373 85 ntBASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CHKB-CPT1BH3BT56 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms