Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC010975.3-201ENST00000618727 978 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC019278.1-201ENST00000623516 479 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC098679.5-201ENST00000624394 571 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AL133412.1-201ENST00000380194 2992 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 ZNF29P-201ENST00000225587 168 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 MIR372-201ENST00000362225 67 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 RNU6-115P-201ENST00000364310 107 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 RNU6-441P-201ENST00000384545 106 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 MIR217-201ENST00000384817 110 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 MIR3074-201ENST00000384885 81 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 MIR153-1-201ENST00000384914 90 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC069218.2-201ENST00000411665 344 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 OR4K6P-201ENST00000416478 897 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC108032.1-201ENST00000416706 207 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 IFNNP1-201ENST00000429219 553 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 MTCO1P3-201ENST00000429327 192 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 FTH1P6-201ENST00000430768 320 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 MOB1AP1-201ENST00000430903 535 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 RPS26P56-201ENST00000444468 240 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AL009048.1-201ENST00000450437 298 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 DUXAP8-207ENST00000456786 622 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 S100A11P1-201ENST00000477525 312 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC084024.2-201ENST00000503480 791 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AL592156.1-201ENST00000508758 304 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 OR8K4P-201ENST00000534608 872 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC074051.3-201ENST00000570238 358 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 RN7SL600P-201ENST00000581811 299 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 MTCO2P2-201ENST00000591258 225 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 DUXAP10-204ENST00000612052 616 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC026368.1-201ENST00000614934 690 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC055839.1-201ENST00000634467 498 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 AC009452.1-201ENST00000640823 606 ntBASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA3F8WFD2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPIPA3F8WFD2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPIPA3F8WFD2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPIPA3F8WFD2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 PNPT1P2-201ENST00000456768 2050 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 RN7SKP44-201ENST00000363602 316 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 RNU4-51P-201ENST00000364206 140 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 RNA5SP283-201ENST00000365604 119 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 Y_RNA.472-201ENST00000384322 102 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 ENSAP1-201ENST00000392855 326 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AL136133.1-201ENST00000413694 376 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 Z93242.1-201ENST00000427102 353 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 OR51AB1P-201ENST00000429046 620 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 PRELID3BP10-201ENST00000431957 584 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC092393.1-201ENST00000439625 742 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC069285.2-201ENST00000440210 275 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AL031313.1-201ENST00000448435 256 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 ABCF2P2-201ENST00000450549 296 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 RPL23AP81-201ENST00000455252 467 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms