Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC011978.2-201ENST00000569835 2054 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 RNU6-492P-201ENST00000363035 104 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 OR1L6-202ENST00000373684 1044 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 RNU6-1122P-201ENST00000384449 107 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 RNU6-780P-201ENST00000391030 104 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AL589647.1-201ENST00000402485 466 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AL356776.1-201ENST00000406574 447 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AF228730.4-201ENST00000421457 183 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 SRSF1P1-201ENST00000424058 520 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC073109.1-201ENST00000445066 978 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 RPL18AP17-201ENST00000455326 198 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC091564.1-201ENST00000464563 479 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC007998.1-201ENST00000474156 672 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AP000893.1-201ENST00000474462 794 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC018710.1-201ENST00000506509 158 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC108064.1-201ENST00000513791 460 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MTND5P4-201ENST00000514978 288 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 RNU6-885P-201ENST00000516607 104 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 RNU6-1153P-201ENST00000516760 105 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 Y_RNA.701-201ENST00000516812 110 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MTND1P35-201ENST00000526739 508 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 OR5AN2P-201ENST00000534535 896 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MIR5697-201ENST00000578045 78 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MTCYBP13-201ENST00000578634 1093 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 BNIP3P11-201ENST00000603878 563 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC112191.3-201ENST00000604371 277 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC007363.1-201ENST00000604736 620 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MLECP1-201ENST00000615893 709 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MIR1910-201ENST00000636955 80 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MIR1321-201ENST00000637766 79 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 PCAT14-202ENST00000627127 3935 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 AC002525.1-201ENST00000624392 1622 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 SAGE4P-201ENST00000442271 3381 ntBASIC4.27□□□□□ -1.73
CGB1A6NKQ9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 AL450345.1-202ENST00000605741 3881 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 RNU4-73P-201ENST00000363164 141 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 SNORA63-201ENST00000363450 132 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 RNA5SP234-201ENST00000363916 119 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 Y_RNA.356-201ENST00000365475 113 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 RNA5SP122-201ENST00000384457 108 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 RNA5SP284-201ENST00000384547 118 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 Y_RNA.548-201ENST00000384656 105 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 U8.14-201ENST00000390843 143 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 SNORA48.4-201ENST00000391089 134 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 OR4K12P-201ENST00000406538 961 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 AC073136.2-201ENST00000417282 849 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 SDCBPP3-201ENST00000419629 891 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.26□□□□□ -1.73
CGB1A6NKQ9 AL953862.1-201ENST00000423016 168 ntBASIC4.26□□□□□ -1.73
CGB1A6NKQ9 AL513174.1-201ENST00000423182 629 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms