Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AP000563.1-201ENST00000490865 758 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 SETP14-201ENST00000497538 873 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC133963.2-201ENST00000513686 578 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 IGKV2-26-201ENST00000518305 343 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 MTND2P7-201ENST00000521337 640 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC079880.2-201ENST00000603790 1213 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AL159169.3-201ENST00000608871 561 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC096577.2-201ENST00000611455 153 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 MIR7973-1-201ENST00000614683 76 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AP006248.2-201ENST00000623309 592 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC015726.3-201ENST00000624501 418 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AL645937.1-201ENST00000641739 1652 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RNU1-18P-201ENST00000363062 164 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RNU6-283P-201ENST00000364788 107 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RNA5SP267-201ENST00000364893 126 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RNU6-98P-201ENST00000384173 107 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RNU1-89P-201ENST00000384592 164 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 HSFY4P-201ENST00000415994 1181 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC023128.2-201ENST00000420880 1223 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 PNRC2P1-201ENST00000423940 420 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 VN1R42P-201ENST00000424651 344 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 OSTCP5-201ENST00000425293 453 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC009965.2-201ENST00000425328 970 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RPL21P10-201ENST00000463521 490 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RPL23AP71-201ENST00000470966 469 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AL358832.1-201ENST00000497800 389 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC113430.1-201ENST00000506872 718 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC008628.1-201ENST00000508663 265 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RNU2-27P-201ENST00000516185 142 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AP003049.1-201ENST00000529418 457 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC106785.3-201ENST00000564064 847 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AL158211.2-201ENST00000607282 395 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AP001033.2-201ENST00000609701 1003 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 OR6C71P-202ENST00000641886 1107 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 RNF6P1-201ENST00000444889 1784 ntBASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMIM28A0A1B0GU29 NMD3P1-201ENST00000439704 1488 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 MFSD8-233ENST00000641482 4860 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 SNORA40.4-201ENST00000390971 128 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AL391417.1-201ENST00000404100 426 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC105402.1-201ENST00000413336 545 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 FO393419.3-201ENST00000428741 282 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC005019.1-201ENST00000436455 431 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC097499.1-201ENST00000444277 208 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 HMGB3P21-201ENST00000452483 547 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 MTCO3P20-201ENST00000454926 688 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC010683.1-201ENST00000473673 378 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AP006245.1-201ENST00000522549 120 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC026333.2-201ENST00000542164 106 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms