Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 SNX5P1-201ENST00000505757 1041 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 HIGD1AP1-201ENST00000550979 275 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AC093227.2-201ENST00000589357 285 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AC007687.1-201ENST00000602704 304 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 GMCL1P2-201ENST00000605230 823 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AL355365.1-201ENST00000616480 294 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AC000367.1-201ENST00000452711 1766 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 U3.6-201ENST00000363622 211 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 MIR92A2-201ENST00000385299 75 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 SNORA81-201ENST00000408493 178 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 OR1AA1P-201ENST00000419597 916 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 B3GNT2P1-201ENST00000434960 952 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AL359073.1-201ENST00000448036 403 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC245166.1-201ENST00000521012 253 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC037471.2-201ENST00000564941 598 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 Z83843.1-201ENST00000604070 3685 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 uc_338.25-201ENST00000613756 156 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 U6.98-201ENST00000637157 84 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AC110792.3-201ENST00000595906 1614 ntBASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRAV27A0A087WT01 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 PTMAP5-201ENST00000393073 333 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 RPL31P52-201ENST00000407532 367 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AC009237.5-201ENST00000414271 501 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 KCTD10P1-201ENST00000434203 625 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 HMGB3P6-201ENST00000444896 598 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 SNORD108-201ENST00000459332 71 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 RPL21P10-201ENST00000463521 490 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 SNRPGP3-201ENST00000469405 227 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AC020898.1-201ENST00000474167 787 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AC092451.1-201ENST00000480211 153 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 HAUS1P1-201ENST00000505275 832 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 PDCL2P2-201ENST00000533651 189 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 RPL21P12-201ENST00000559810 515 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 BNIP3P5-201ENST00000562290 498 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 MIR2682-201ENST00000580305 110 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AP001180.3-201ENST00000582221 145 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AC073657.2-201ENST00000605661 303 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AL589935.2-201ENST00000616471 1231 ntBASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRAV27A0A087WT01 GABPAP-201ENST00000419271 1356 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 RNA5SP167-201ENST00000365461 116 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 RPL30P3-201ENST00000424262 333 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 NIPA2P1-201ENST00000426223 976 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 MTCO3P21-201ENST00000430791 643 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AL138799.3-201ENST00000438968 350 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AC008155.2-201ENST00000464337 397 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 TMED11P-201ENST00000479478 690 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms