Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 RPL23AP64-201ENST00000469465 435 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 RN7SL809P-201ENST00000482040 297 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 RPL22P13-201ENST00000493291 347 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC005912.1-201ENST00000495392 255 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 FTH1P9-201ENST00000513251 355 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 RNU6-699P-201ENST00000517081 110 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 FAM60DP-201ENST00000524174 632 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC007375.1-201ENST00000554513 578 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 MT1CP-201ENST00000567054 174 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC063977.7-201ENST00000594454 337 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC091133.5-201ENST00000603088 301 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC009229.3-201ENST00000608056 282 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC091768.1-201ENST00000609258 930 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 MTCO1P24-201ENST00000515438 1558 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 MTND5P27-201ENST00000428871 1720 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 BDP1P-201ENST00000582658 1990 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 BRAFP1-201ENST00000445336 2703 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 RNA5SP219-201ENST00000390940 113 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 RNU2-22P-201ENST00000411266 212 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC069218.2-201ENST00000411665 344 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 CALM2P2-201ENST00000428512 440 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 GAPDHP33-201ENST00000443168 1013 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC104057.1-201ENST00000515547 497 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 RNA5SP318-201ENST00000516352 92 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AL049779.2-201ENST00000553847 315 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 MIR3941-201ENST00000582572 103 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC013244.1-201ENST00000604279 193 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AL359704.2-201ENST00000604335 521 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC067931.1-201ENST00000624190 671 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AL732372.2-225ENST00000642124 456 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 AC105114.1-201ENST00000624795 1862 ntBASIC6.07□□□□□ -1.44
HRH3Q9Y5N1 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 AC009779.8-201ENST00000641684 4384 ntBASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 AC083837.1-201ENST00000565297 2994 ntBASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 NLRP3P1-201ENST00000622303 1785 ntBASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 AL136531.3-201ENST00000624378 3658 ntBASIC6.06□□□□□ -1.44
HRH3Q9Y5N1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms