Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC245028.2-201ENST00000458673 253 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC079168.1-201ENST00000458741 345 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 RPS3AP41-201ENST00000462701 778 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 RPL31P50-201ENST00000471002 296 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 COX6CP8-201ENST00000522620 226 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 OR6C7P-201ENST00000547875 934 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 EDDM3DP-201ENST00000554692 434 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC053481.3-201ENST00000577881 843 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC068790.6-201ENST00000602558 258 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AL355812.1-201ENST00000603215 216 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC010857.1-201ENST00000606398 594 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC093799.2-201ENST00000610062 578 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 EIF3FP1-201ENST00000613970 806 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC093591.3-201ENST00000634516 308 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC084035.1-201ENST00000634543 607 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AL360270.2-201ENST00000562952 5985 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 INTS6P1-201ENST00000504674 2530 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 EIF2AP4-201ENST00000424793 1781 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AL592437.2-201ENST00000421655 2434 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC000374.1-201ENST00000434698 1745 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 DCAF13P1-201ENST00000495256 1330 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 RN7SKP104-201ENST00000362605 328 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 SNORA51.8-201ENST00000384234 132 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 MIR600-201ENST00000385007 98 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 RNU6-952P-201ENST00000391164 108 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 OR6C69P-201ENST00000394268 893 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 RNU2-16P-201ENST00000410712 136 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 OR4F13P-201ENST00000428478 931 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AL049745.1-201ENST00000433953 286 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC004980.3-201ENST00000447046 365 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 EPS15P1-201ENST00000448836 336 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC104634.1-201ENST00000452720 462 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC092647.2-201ENST00000452998 253 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC007686.1-201ENST00000488511 463 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 ARL2BPP4-201ENST00000506854 471 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC025881.1-201ENST00000518851 512 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 OR5AP1P-201ENST00000529730 940 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 CR383656.6-201ENST00000550518 394 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AL391156.1-201ENST00000554965 554 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC068446.3-201ENST00000555285 382 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AGGF1P4-201ENST00000568249 801 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 LARP7P2-201ENST00000575306 125 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 PRPF19P1-201ENST00000584766 898 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC080078.2-201ENST00000603766 501 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AL009028.1-201ENST00000604895 802 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC097468.3-201ENST00000607956 456 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC090116.1-201ENST00000615679 446 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC009509.4-201ENST00000619202 509 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AL445264.1-201ENST00000621719 171 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC091905.4-201ENST00000623432 202 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC092104.1-201ENST00000497346 1441 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC092747.4-201ENST00000620519 1861 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC022893.2-201ENST00000564832 3296 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 ZNF33CP-201ENST00000432492 2030 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 AC100757.1-201ENST00000616872 1835 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms