Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC025263.3-201ENST00000622965 1396 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 RNU1-32P-201ENST00000363937 159 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 SNORA62-201ENST00000365493 153 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 GJA6P-201ENST00000415117 1042 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AL590139.1-201ENST00000416267 400 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 PAICSP7-201ENST00000419829 962 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC016712.1-201ENST00000431088 378 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AL354941.1-201ENST00000438600 464 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 MTND3P1-201ENST00000441336 220 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AL929288.2-201ENST00000446368 407 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 MRPL42P4-201ENST00000453267 443 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 RPL21P134-201ENST00000453468 483 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC090142.1-201ENST00000465776 462 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 RPL23AP2-201ENST00000471227 466 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 RPL7P16-201ENST00000479738 738 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC068587.1-201ENST00000483613 781 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 RPS6P4-201ENST00000494693 758 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC139783.2-201ENST00000504847 1145 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC023632.1-201ENST00000518463 375 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC105185.1-201ENST00000518705 535 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 NDUFA5P2-201ENST00000519723 344 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC044913.1-201ENST00000557200 430 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC068714.1-201ENST00000559623 800 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 HMGB3P26-201ENST00000560051 582 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC090515.3-201ENST00000560431 315 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 MIR5699-201ENST00000578903 90 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC234771.5-201ENST00000600161 514 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 VN1R82P-201ENST00000601481 356 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC078795.2-201ENST00000602835 1252 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AP005137.2-201ENST00000609238 400 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC007497.1-201ENST00000610421 561 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AL158063.1-201ENST00000615349 536 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC087385.3-201ENST00000620477 187 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC091905.2-201ENST00000623143 306 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 U6.107-201ENST00000637108 79 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 KARSP3-201ENST00000571212 1504 ntBASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGB1Q9Y5G3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 A2MP1-204ENST00000566278 4130 ntBASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 RNU6-560P-201ENST00000364007 108 ntBASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 RNA5SP455-201ENST00000365190 119 ntBASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 RNU6-1200P-201ENST00000384162 107 ntBASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 RNU6-452P-201ENST00000384406 107 ntBASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 RPL23AP48-201ENST00000406913 488 ntBASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 TCEA1P4-201ENST00000415066 844 ntBASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 AC062016.2-201ENST00000420950 676 ntBASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGB1Q9Y5G3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms