Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AC104446.1-201ENST00000613728 1321 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AC097713.2-201ENST00000430199 356 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 HSFY3P-201ENST00000444242 1191 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 RN7SL807P-201ENST00000470923 297 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 UBA52P3-201ENST00000491303 382 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AC023050.1-201ENST00000498198 304 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AC112198.4-201ENST00000515450 351 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 RNA5SP164-201ENST00000516533 110 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AP002906.1-201ENST00000603405 233 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 YPEL5P2-201ENST00000605553 359 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AL355365.1-201ENST00000616480 294 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AC073055.1-201ENST00000456901 1621 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 ZNF849P-201ENST00000594711 1566 ntBASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 IL6STP1-201ENST00000346911 1020 ntBASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 RNU6-468P-201ENST00000384003 109 ntBASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 ELOCP11-201ENST00000436690 332 ntBASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 ELOCP16-201ENST00000444494 332 ntBASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 APOOP2-201ENST00000461561 539 ntBASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 IGKV2-38-201ENST00000517443 247 ntBASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 AC119744.1-201ENST00000454746 1715 ntBASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 TMEM161BP1-201ENST00000457388 1457 ntBASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM4Q9ULL8 U6.112-201ENST00000384129 70 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 MIR128-1-201ENST00000384921 82 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 VN1R25P-201ENST00000443385 738 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 GXYLT1P1-201ENST00000446657 490 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 VN1R40P-201ENST00000455196 941 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 RPS4XP10-201ENST00000465034 731 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 RPL32P34-201ENST00000486380 400 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AP003102.1-201ENST00000525638 661 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 CYP4A43P-201ENST00000568156 121 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 MIR6852-201ENST00000621699 66 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AC093535.2-201ENST00000624769 2326 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 NSRP1P1-201ENST00000444067 1693 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 FAM35BP-202ENST00000497389 3337 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 SNORA51.12-201ENST00000384448 134 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 RPL7AP73-201ENST00000413490 353 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AL121878.1-201ENST00000418638 859 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AC241520.1-201ENST00000422654 1099 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AL512649.1-201ENST00000428997 581 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 RBMY2UP-201ENST00000453474 324 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 RPS4XP6-201ENST00000477670 797 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 RAC1P2-201ENST00000511164 579 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AC006960.3-201ENST00000561845 705 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AC018645.2-201ENST00000609151 472 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 AC124016.2-201ENST00000610058 665 ntBASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC7.24□□□□□ -1.25
SHROOM4Q9ULL8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC7.23□□□□□ -1.25
SHROOM4Q9ULL8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
SHROOM4Q9ULL8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM4Q9ULL8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC7.23□□□□□ -1.25
SHROOM4Q9ULL8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SHROOM4Q9ULL8 RNU6-207P-201ENST00000384137 107 ntBASIC7.23□□□□□ -1.25
SHROOM4Q9ULL8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM4Q9ULL8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.23□□□□□ -1.25
SHROOM4Q9ULL8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms