Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 GPR143P-201ENST00000434155 205 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 KRT8P51-201ENST00000438938 274 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 AP1S2P1-201ENST00000457344 379 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 RPS23P2-201ENST00000463671 415 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 MTCO2P29-201ENST00000465212 189 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 TMEM248P1-201ENST00000510579 951 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 ZNF705CP-201ENST00000530515 889 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC010591.1-201ENST00000603941 649 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 AL589674.2-201ENST00000604304 337 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 NANOGP3-201ENST00000605855 286 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC090948.1-201ENST00000607464 549 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC025470.1-201ENST00000510053 2032 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNTN3Q9P232 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC105074.1-201ENST00000623380 3095 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNTN3Q9P232 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNTN3Q9P232 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNTN3Q9P232 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC087516.1-201ENST00000561236 2428 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNTN3Q9P232 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 NACAP2-201ENST00000318548 624 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 RPL7P26-201ENST00000333817 754 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 RNU6-169P-201ENST00000365336 107 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 RNU6-921P-201ENST00000384361 107 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 RNA5SP91-201ENST00000390902 119 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 RGS17P1-201ENST00000423358 553 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 RPL37P1-201ENST00000432310 284 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 IFNA20P-201ENST00000436840 528 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 CYCSP51-201ENST00000443545 318 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 AL450996.1-201ENST00000445574 1202 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 CR383656.1-201ENST00000484916 377 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 DUTP1-201ENST00000493631 470 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 RPS4XP18-201ENST00000495480 763 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 OR4R1P-201ENST00000529879 463 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.15□□□□□ -1.42
CNTN3Q9P232 AL353997.4-201ENST00000586196 166 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC025857.2-201ENST00000602711 238 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 BX323046.1-201ENST00000610145 535 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC105429.2-201ENST00000610567 517 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNTN3Q9P232 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNTN3Q9P232 AC091953.2-201ENST00000623979 160 ntBASIC6.15□□□□□ -1.42
CNTN3Q9P232 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNTN3Q9P232 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CNTN3Q9P232 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNTN3Q9P232 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNTN3Q9P232 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CNTN3Q9P232 AL118496.1-201ENST00000440201 1812 ntBASIC6.15□□□□□ -1.43
CNTN3Q9P232 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CNTN3Q9P232 AL731532.1-201ENST00000623972 4236 ntBASIC6.15□□□□□ -1.43
CNTN3Q9P232 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.15□□□□□ -1.43
CNTN3Q9P232 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.15□□□□□ -1.43
CNTN3Q9P232 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CNTN3Q9P232 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CNTN3Q9P232 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms