Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HMGB3P11-201ENST00000440127 604 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 COL11A2P1-205ENST00000441798 676 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 GAPDHP37-201ENST00000442317 968 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 MTCO3P45-201ENST00000443036 613 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 RPS23P9-201ENST00000448848 438 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 RPS20P32-201ENST00000456044 356 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 RPL35AP28-201ENST00000459730 331 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AC010683.1-201ENST00000473673 378 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 RPL5P22-201ENST00000480199 884 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 RN7SL214P-201ENST00000487317 265 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AL049874.2-201ENST00000492636 288 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 H3F3AP3-201ENST00000497682 407 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 TRBVA-201ENST00000498804 316 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AC018797.3-201ENST00000513388 1241 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 RFPL4AP5-201ENST00000514977 504 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 RNA5SP337-201ENST00000517007 109 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 MIR4424-201ENST00000585257 86 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AC011477.5-201ENST00000586571 259 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 MRPL57P1-201ENST00000621486 265 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 SNX18P10-201ENST00000625014 519 ntBASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.31□□□□□ -1.4
CUEDC1Q9NWM3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC107027.3-201ENST00000565095 3473 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AL158163.1-201ENST00000603915 1649 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 RNA5SP391-201ENST00000363456 119 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 RNU6-266P-201ENST00000364225 107 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 RNU6-593P-201ENST00000364716 112 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 RNA5SP85-201ENST00000365378 119 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 Y_RNA.350-201ENST00000365409 98 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 RNU6-657P-201ENST00000383904 107 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 SNORA75B-201ENST00000384053 137 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AL109755.1-201ENST00000401791 649 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 RNA5SP345-201ENST00000410646 108 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 YWHAZP8-201ENST00000436935 731 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC073909.1-201ENST00000447112 999 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC097359.1-201ENST00000447946 463 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AL596266.1-201ENST00000448132 400 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 RPS15AP17-201ENST00000470598 390 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AP001025.2-201ENST00000490908 477 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 Y_RNA.661-201ENST00000516003 99 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AP004609.2-201ENST00000532177 190 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AL356432.3-201ENST00000568952 465 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC114477.1-201ENST00000605097 605 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC015712.7-201ENST00000615211 635 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 MIR7854-201ENST00000620068 65 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AP001264.1-201ENST00000620602 703 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC111152.1-202ENST00000635848 339 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AL669831.3-213ENST00000636676 183 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC121333.1-201ENST00000567488 2709 ntBASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms