Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CISHQ9NSE2 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CISHQ9NSE2 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CISHQ9NSE2 SNORA62.2-201ENST00000364672 152 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CISHQ9NSE2 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CISHQ9NSE2 TAF9BP1-201ENST00000396646 746 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 AC093084.1-201ENST00000424233 687 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 ISCA1P2-201ENST00000438679 421 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 AC239809.1-201ENST00000450470 217 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 AC114982.2-201ENST00000461396 358 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 AC110794.1-201ENST00000505816 425 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 AC004024.1-201ENST00000549244 247 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.45□□□□□ -1.86
CISHQ9NSE2 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CISHQ9NSE2 AC004777.1-201ENST00000624317 287 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 AC073476.4-201ENST00000628409 72 ntBASIC3.45□□□□□ -1.86
CISHQ9NSE2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CISHQ9NSE2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CISHQ9NSE2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CISHQ9NSE2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CISHQ9NSE2 AL139811.1-201ENST00000424779 2299 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 AC008725.1-201ENST00000605123 2263 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CISHQ9NSE2 MTCO1P14-201ENST00000441695 1559 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 XIAPP3-201ENST00000312918 795 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 SKINT1L-201ENST00000401057 817 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 RNA5SP120-201ENST00000410900 112 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.44□□□□□ -1.86
CISHQ9NSE2 AC073464.3-201ENST00000422564 712 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.44□□□□□ -1.86
CISHQ9NSE2 AC073069.1-201ENST00000428657 441 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 AL606490.8-201ENST00000441624 319 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 AL591503.2-201ENST00000442314 1005 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.44□□□□□ -1.86
CISHQ9NSE2 AC115115.1-201ENST00000449927 248 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 RNU6-1218P-201ENST00000458990 108 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.44□□□□□ -1.86
CISHQ9NSE2 MTND6P6-201ENST00000478031 263 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 AL358832.1-201ENST00000497800 389 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.44□□□□□ -1.86
CISHQ9NSE2 AC010627.1-201ENST00000503819 1294 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CISHQ9NSE2 SLC25A15P5-201ENST00000508033 253 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.44□□□□□ -1.86
CISHQ9NSE2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.44□□□□□ -1.86
CISHQ9NSE2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CISHQ9NSE2 VN1R79P-201ENST00000593540 513 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 AL606834.2-201ENST00000602954 668 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 ABI1P1-201ENST00000603375 1120 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 SRGNP1-201ENST00000603392 451 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 MIR7112-201ENST00000616126 65 ntBASIC3.44□□□□□ -1.86
CISHQ9NSE2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CISHQ9NSE2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CISHQ9NSE2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CISHQ9NSE2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CISHQ9NSE2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CISHQ9NSE2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 RNU6-304P-201ENST00000364855 107 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 RNU6-225P-201ENST00000384613 103 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 RNA5SP44-201ENST00000410446 133 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 RNA5SP107-201ENST00000411358 122 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 LIPT1P1-201ENST00000415870 1186 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 TRGV7-201ENST00000427089 353 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC091862.1-201ENST00000438016 1100 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 RPL6P9-201ENST00000466502 859 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC034236.1-201ENST00000469891 373 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 RPL32P34-201ENST00000486380 400 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC108078.3-201ENST00000502633 489 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC104027.1-201ENST00000521887 300 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CISHQ9NSE2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC034236.3-201ENST00000605999 461 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC091903.1-201ENST00000624322 454 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 AL353746.1-201ENST00000566293 6881 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
CISHQ9NSE2 AC090229.1-201ENST00000590983 1609 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms