Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 IGKV2-38-201ENST00000517443 247 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC010306.1-201ENST00000523223 1117 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 MTND1P6-201ENST00000523621 946 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 CCNG2P1-201ENST00000549521 1000 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC007599.1-201ENST00000568688 1174 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC087499.8-201ENST00000578406 226 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC005972.3-201ENST00000606304 481 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC011374.2-201ENST00000607135 526 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC128687.2-201ENST00000609657 566 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 MIR486-1-201ENST00000612171 68 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC005344.1-201ENST00000613391 459 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC020978.9-201ENST00000624380 1141 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AP004289.2-201ENST00000444413 1457 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AP002001.2-201ENST00000529025 1469 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 RNA5SP399-201ENST00000364003 117 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 SNORA5A-201ENST00000384111 134 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 RNU6-328P-201ENST00000390887 106 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 PRRC2CP1-201ENST00000404428 159 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 RNU2-17P-201ENST00000410290 190 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AL365396.1-201ENST00000430854 671 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 HMGB1P45-201ENST00000435986 653 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 Z77249.1-201ENST00000444622 1175 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 CYCSP53-201ENST00000455540 265 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 TMEM248P1-201ENST00000510579 951 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 RNU1-95P-201ENST00000516357 160 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 RNU1-128P-201ENST00000516704 160 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AP000619.3-201ENST00000535634 1127 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AC095038.2-201ENST00000621464 1070 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AC009093.8-201ENST00000641769 292 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 LINC02471-203ENST00000641941 4752 ntBASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
TM9SF3Q9HD45 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
TM9SF3Q9HD45 AP001148.1-201ENST00000624124 2359 ntBASIC3.9□□□□□ -1.78
TM9SF3Q9HD45 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
TM9SF3Q9HD45 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TM9SF3Q9HD45 MIR423-201ENST00000362201 94 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 SNORA7.2-201ENST00000364446 145 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 SNORA51.2-201ENST00000364595 132 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC083799.1-201ENST00000366451 910 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 RHEBP3-201ENST00000411920 351 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 RPS20P25-201ENST00000412447 352 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 RPL31P2-201ENST00000413849 377 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 MTND2P16-201ENST00000419987 799 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 HIGD1AP4-201ENST00000430194 280 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AL513343.1-201ENST00000451818 792 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC126121.1-201ENST00000482313 553 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AL442163.2-201ENST00000553912 710 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AP003392.5-201ENST00000607857 415 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AL391497.1-201ENST00000608671 547 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AC012314.7-201ENST00000619693 93 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 AL034408.1-202ENST00000636088 415 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 ZNF90P1-201ENST00000480493 1951 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 BDP1P-201ENST00000582658 1990 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms