Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 IQCB2P-201ENST00000401788 1633 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC073136.1-201ENST00000449426 2884 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC092125.1-201ENST00000562568 1995 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 Z95331.1-201ENST00000623075 23112 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 ADAM5-202ENST00000399789 1942 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC091046.3-201ENST00000631455 1574 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC083843.2-201ENST00000568248 6253 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC093535.2-201ENST00000624769 2326 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 GNG5P1-201ENST00000255500 204 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 SNORA64.1-201ENST00000362600 132 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 RNA5SP258-201ENST00000362750 119 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 U3.29-201ENST00000391296 212 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 RNU6-195P-201ENST00000411352 109 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AL359704.1-201ENST00000411586 781 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC078974.1-201ENST00000411597 223 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 MTND1P23-201ENST00000416931 372 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC127526.1-201ENST00000417526 366 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AL589872.1-201ENST00000426602 288 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 OR2B7P-201ENST00000429302 934 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 RPL12P17-201ENST00000432393 498 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 VN1R54P-201ENST00000435210 1049 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 RN7SL466P-201ENST00000497546 295 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC091912.1-201ENST00000511351 248 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 RN7SKP234-201ENST00000517173 224 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 IGKV2D-36-201ENST00000518643 226 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC068446.3-201ENST00000555285 382 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 UBE2FP2-201ENST00000566646 462 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 MIR4505-201ENST00000582238 73 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 FO393422.1-201ENST00000603908 708 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 uc_338.7-201ENST00000621834 124 ntBASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM55Q9BYV6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 SNORA48.4-201ENST00000391089 134 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 RPL17P50-201ENST00000396131 546 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 MTND1P21-201ENST00000412991 285 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 BX295541.1-201ENST00000417774 250 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AL355433.1-201ENST00000422804 300 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AL353777.1-201ENST00000425552 326 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AL662874.1-201ENST00000426065 230 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 RPL7AP49-201ENST00000429522 581 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 PSMA2P3-201ENST00000429685 675 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 MRPS10P2-201ENST00000431226 381 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AL591438.1-201ENST00000433508 581 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 UBE2V1P8-201ENST00000437166 265 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AL591623.2-201ENST00000449978 222 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 IFNWP4-201ENST00000453148 294 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AZGP1P2-201ENST00000454506 345 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AP1S2P1-201ENST00000457344 379 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AP000797.2-201ENST00000475768 606 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 RPL7P39-201ENST00000481157 744 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms