Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC012213.3-201ENST00000577199 777 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 MIR4512-201ENST00000583257 77 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 MIR4691-201ENST00000583764 85 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC008759.1-201ENST00000589783 983 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC022146.1-201ENST00000595307 847 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC115286.1-201ENST00000604298 434 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL139286.2-201ENST00000606838 396 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC107214.2-201ENST00000608204 634 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 SNORD91B-202ENST00000608459 222 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL627230.1-201ENST00000613077 211 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL591926.8-201ENST00000616876 211 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL359715.5-201ENST00000623431 443 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC093535.2-201ENST00000624769 2326 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL031985.3-201ENST00000565390 2449 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC099654.2-201ENST00000433031 1980 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 RNU6-433P-201ENST00000363216 104 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 SNORA51.6-201ENST00000384151 125 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 HMGB1P17-201ENST00000403495 628 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AL512430.2-201ENST00000406786 339 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 PGBD4P8-201ENST00000412993 562 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 HMGB1P11-201ENST00000413899 637 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 BMI1P1-201ENST00000445879 941 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 EEF1E1P1-201ENST00000446998 430 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC026410.2-201ENST00000460281 156 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 RPSAP50-201ENST00000481955 852 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 RNU2-30P-201ENST00000516209 141 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC005951.1-201ENST00000576706 485 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC103591.3-201ENST00000608684 209 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 U6.101-201ENST00000637707 76 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 C4BPAP1-201ENST00000415474 1893 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 AC008758.3-201ENST00000507003 1829 ntBASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM54Q9BYV2 ELL2P4-201ENST00000446870 1376 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 SALL4P2-201ENST00000423288 2910 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 AC011978.2-201ENST00000569835 2054 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 RNU6-1243P-201ENST00000364028 107 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 RNU6-1226P-201ENST00000384317 107 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 SNORA70-201ENST00000384436 135 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 EIF5P1-201ENST00000400019 1231 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 OR8G2P-201ENST00000412796 908 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 AC073136.2-201ENST00000417282 849 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 MTCO2P34-201ENST00000421994 607 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 CYCSP46-201ENST00000423569 204 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 DLGAP5P1-201ENST00000430307 464 ntBASIC4.78□□□□□ -1.64
TRIM54Q9BYV2 AL451139.1-201ENST00000434718 346 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms