Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.91□□□□□ -1.94
USP9XQ93008 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.91□□□□□ -1.94
USP9XQ93008 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.91□□□□□ -1.94
USP9XQ93008 AC010680.4-201ENST00000605334 543 ntBASIC2.91□□□□□ -1.94
USP9XQ93008 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
USP9XQ93008 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
USP9XQ93008 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.9□□□□□ -1.94
USP9XQ93008 SNORA67.4-201ENST00000384688 142 ntBASIC2.9□□□□□ -1.94
USP9XQ93008 RNU4-47P-201ENST00000410876 114 ntBASIC2.9□□□□□ -1.94
USP9XQ93008 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.9□□□□□ -1.94
USP9XQ93008 AC022018.1-201ENST00000430685 241 ntBASIC2.9□□□□□ -1.94
USP9XQ93008 AC007563.3-201ENST00000433233 371 ntBASIC2.9□□□□□ -1.94
USP9XQ93008 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.9□□□□□ -1.94
USP9XQ93008 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.9□□□□□ -1.94
USP9XQ93008 MTND6P33-201ENST00000571794 183 ntBASIC2.9□□□□□ -1.94
USP9XQ93008 AL353997.5-201ENST00000618886 171 ntBASIC2.9□□□□□ -1.94
USP9XQ93008 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
USP9XQ93008 AC093010.3-201ENST00000570269 15214 ntBASIC2.9□□□□□ -1.95
USP9XQ93008 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC2.9□□□□□ -1.95
USP9XQ93008 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
USP9XQ93008 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.9□□□□□ -1.95
USP9XQ93008 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.9□□□□□ -1.95
USP9XQ93008 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.9□□□□□ -1.95
USP9XQ93008 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.9□□□□□ -1.95
USP9XQ93008 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.9□□□□□ -1.95
USP9XQ93008 NPM1P28-201ENST00000492269 840 ntBASIC2.9□□□□□ -1.95
USP9XQ93008 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.9□□□□□ -1.95
USP9XQ93008 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.9□□□□□ -1.95
USP9XQ93008 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.9□□□□□ -1.95
USP9XQ93008 YWHAZP1-201ENST00000556286 722 ntBASIC2.9□□□□□ -1.95
USP9XQ93008 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC2.9□□□□□ -1.95
USP9XQ93008 AC020895.1-201ENST00000595362 272 ntBASIC2.9□□□□□ -1.95
USP9XQ93008 KLKP1-201ENST00000595979 403 ntBASIC2.9□□□□□ -1.95
USP9XQ93008 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.9□□□□□ -1.95
USP9XQ93008 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
USP9XQ93008 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.9□□□□□ -1.95
USP9XQ93008 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
USP9XQ93008 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP9XQ93008 AP000542.2-201ENST00000623199 6179 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 RN7SKP192-201ENST00000411291 327 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 DYNLL1P7-201ENST00000429273 258 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 HMGB3P12-201ENST00000438745 556 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 RNA5SP103-201ENST00000459503 118 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 AC023598.1-201ENST00000472521 361 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.89□□□□□ -1.95
USP9XQ93008 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.89□□□□□ -1.95
USP9XQ93008 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.89□□□□□ -1.95
USP9XQ93008 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.89□□□□□ -1.95
USP9XQ93008 AL773545.4-201ENST00000637262 310 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 AL513478.4-201ENST00000641636 310 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
USP9XQ93008 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP9XQ93008 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
USP9XQ93008 LINC01355-201ENST00000566551 5444 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 IPO8P1-201ENST00000455509 3109 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
USP9XQ93008 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP9XQ93008 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.89□□□□□ -1.95
USP9XQ93008 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.89□□□□□ -1.95
USP9XQ93008 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.89□□□□□ -1.95
USP9XQ93008 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.89□□□□□ -1.95
USP9XQ93008 CKS1BP1-201ENST00000555221 240 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.89□□□□□ -1.95
USP9XQ93008 AL162574.2-201ENST00000614618 657 ntBASIC2.89□□□□□ -1.95
USP9XQ93008 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC2.89□□□□□ -1.95
USP9XQ93008 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP9XQ93008 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP9XQ93008 YES1-203ENST00000577961 4554 ntTSL 5 BASIC2.88□□□□□ -1.95
USP9XQ93008 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.88□□□□□ -1.95
USP9XQ93008 AL049780.3-201ENST00000624612 1583 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 MIR337-201ENST00000362281 93 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 SNORD114-26-201ENST00000363543 72 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.88□□□□□ -1.95
USP9XQ93008 TAF9P1-201ENST00000445421 515 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 TAF9P2-201ENST00000454958 515 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 RNU4-29P-201ENST00000515943 174 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 VN1R90P-201ENST00000595717 726 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.88□□□□□ -1.95
USP9XQ93008 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
USP9XQ93008 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP9XQ93008 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP9XQ93008 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP9XQ93008 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP9XQ93008 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP9XQ93008 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
USP9XQ93008 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP9XQ93008 MTCO1P8-201ENST00000416914 1523 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 AL161781.1-201ENST00000354277 403 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.88□□□□□ -1.95
USP9XQ93008 SNORA18.3-201ENST00000384122 132 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 EEF1A1P41-201ENST00000414667 207 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.88□□□□□ -1.95
USP9XQ93008 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.88□□□□□ -1.95
USP9XQ93008 UBE2D3P1-201ENST00000436669 444 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 AL513328.1-201ENST00000446460 224 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 RPS29P26-201ENST00000477483 171 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP9XQ93008 FCF1P3-201ENST00000496394 590 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 KLHL2P1-201ENST00000508691 521 ntBASIC2.88□□□□□ -1.95
USP9XQ93008 AC138938.1-201ENST00000515431 782 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms