Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNA5SP374-201ENST00000362939 125 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 SNORA5B-201ENST00000363786 132 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 RNU6-7-201ENST00000364784 107 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 RNU6-8-201ENST00000365467 107 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 AC002524.1-201ENST00000411687 547 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 AL355994.1-201ENST00000424379 260 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 AC023598.1-201ENST00000472521 361 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 HIGD1AP3-201ENST00000515857 278 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 AL606834.2-201ENST00000602954 668 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 AC007496.3-201ENST00000624987 3443 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 SYT14P1-202ENST00000600441 1448 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 RNA5SP502-201ENST00000362694 119 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 RNA5SP126-201ENST00000365092 109 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 BX323014.1-201ENST00000412876 237 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 BX842559.1-201ENST00000419615 532 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 RPF2P1-201ENST00000424137 906 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 UBE2V1P1-201ENST00000430836 445 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 AC011242.1-201ENST00000433596 1158 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 AC020893.1-201ENST00000502452 580 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 APOOP4-201ENST00000513530 597 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 AC084033.1-201ENST00000550830 633 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 AL356321.1-201ENST00000621360 228 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 AC005183.1-201ENST00000603687 1979 ntBASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM3Q8TF72 ZNF90P1-201ENST00000480493 1951 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC063979.1-201ENST00000415539 377 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 PPIAP17-201ENST00000438507 471 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 RPL7L1P1-201ENST00000448259 785 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC011825.1-201ENST00000484967 388 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 GOLGA5P1-201ENST00000507317 980 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 PHBP14-201ENST00000512887 367 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 FABP5P12-201ENST00000515543 389 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 RPL12P22-201ENST00000519073 490 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC011602.1-201ENST00000546484 331 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 NCAPGP2-201ENST00000557911 754 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 IGHV3-29-201ENST00000604817 344 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 MIR7112-201ENST00000616126 65 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC234772.1-201ENST00000377927 937 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 ATP5C1P1-201ENST00000441945 895 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC006445.1-201ENST00000491925 405 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC021733.2-201ENST00000518830 497 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 AC074140.1-201ENST00000621617 208 ntBASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM3Q8TF72 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 OR4G1P-202ENST00000641173 1788 ntBASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 U3.19-201ENST00000390893 196 ntBASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 OR6K4P-201ENST00000423179 955 ntBASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 RPS12P18-201ENST00000442381 270 ntBASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 VN1R96P-201ENST00000446052 858 ntBASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 AP000926.3-201ENST00000497201 299 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms