Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 PARP4P3-201ENST00000510265 317 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 Y_RNA.695-201ENST00000516715 107 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 MTCYBP20-201ENST00000524239 1129 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AL512347.1-201ENST00000566420 503 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 MIR5699-201ENST00000578903 90 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AL049794.2-201ENST00000616301 365 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC015804.1-201ENST00000622935 435 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AL356121.2-201ENST00000624715 780 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 MTND4P5-201ENST00000435821 1374 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 OR14L1P-202ENST00000641545 3009 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC093775.1-201ENST00000624154 1868 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 SAMMSON-213ENST00000641336 1521 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 Y_RNA.25-201ENST00000362528 102 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 RNA5SP283-201ENST00000365604 119 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 SNORA9-201ENST00000384215 133 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 Y_RNA.505-201ENST00000384489 102 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 SNORA48.4-201ENST00000391089 134 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AL357515.1-201ENST00000402967 542 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AL390316.1-201ENST00000406279 553 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 MIR1284-201ENST00000408337 120 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 RNA5SP296-201ENST00000410523 111 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 RNA5SP345-201ENST00000410646 108 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC068533.2-201ENST00000411872 306 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AL136133.1-201ENST00000413694 376 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AL031779.1-201ENST00000415663 330 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC062016.2-201ENST00000420950 676 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 Z99497.1-201ENST00000421282 135 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 RPL7P2-201ENST00000427639 268 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 RPL37P1-201ENST00000432310 284 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 NF1P3-201ENST00000457709 450 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 SETP11-201ENST00000473027 690 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC068724.1-201ENST00000487100 792 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 RPL7P38-201ENST00000488396 739 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 IGBP1P4-201ENST00000503202 879 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC027309.2-201ENST00000520566 192 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC012213.3-201ENST00000577199 777 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 MIR4286-201ENST00000580651 93 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 PSMA6P4-201ENST00000603247 718 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AC108738.1-201ENST00000603703 237 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 AL353600.1-201ENST00000608148 251 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
SMC1BQ8NDV3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 STX3-208ENST00000641815 3236 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 MIR372-201ENST00000362225 67 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 MIR449B-201ENST00000384995 97 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AC233981.1-201ENST00000423224 461 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 YME1L1P1-201ENST00000429435 297 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AC241584.1-201ENST00000438469 1241 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AC000111.2-201ENST00000448200 210 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms