Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC099560.2-201ENST00000457554 255 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC108022.1-201ENST00000493466 478 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC112198.1-201ENST00000505369 1220 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AL117351.2-201ENST00000513571 157 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 RNU6-1225P-201ENST00000516336 65 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 RNU6-678P-201ENST00000516832 109 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 NDUFA5P2-201ENST00000519723 344 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 IGKV2-36-201ENST00000519999 223 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 OR5M2P-201ENST00000529003 936 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 BRD9P1-201ENST00000529855 560 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 GTF2IP8-201ENST00000560687 584 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 UBE2FP2-201ENST00000566646 462 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC016180.1-201ENST00000567945 403 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC091042.1-201ENST00000579213 173 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC090181.2-201ENST00000602975 672 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC103792.1-201ENST00000603591 919 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC005084.1-201ENST00000605160 304 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC243654.2-201ENST00000612843 443 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC008083.4-201ENST00000615076 444 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AL158063.1-201ENST00000615349 536 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC091905.2-201ENST00000623143 306 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC084035.1-201ENST00000634543 607 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 MTND4P4-201ENST00000439033 1366 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 Y_RNA.311-201ENST00000365068 96 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 RNU6-619P-201ENST00000365146 108 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 MIR217-201ENST00000384817 110 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 MT-TH-201ENST00000387441 69 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 RNU6-192P-201ENST00000391253 100 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 Y_RNA.599-201ENST00000410489 109 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 RNU2-42P-201ENST00000410697 113 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 Z93242.1-201ENST00000427102 353 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 USP9YP14-201ENST00000430663 563 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 PPIAP17-201ENST00000438507 471 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 RPL36AP15-201ENST00000444514 266 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AP000936.2-201ENST00000447151 681 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 RPS27AP15-201ENST00000447672 466 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 RPL7P1-201ENST00000468161 747 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 RPL7P9-201ENST00000468715 747 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC090013.1-201ENST00000485147 480 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 NDUFA5P12-201ENST00000503796 343 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC109471.1-201ENST00000511631 612 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AP001922.4-201ENST00000526967 290 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC090751.1-201ENST00000566966 267 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 MIR4436B2-201ENST00000581415 91 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC090312.2-201ENST00000582687 378 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC007448.1-201ENST00000582714 234 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 MIR4436B1-201ENST00000583272 91 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AL390838.2-201ENST00000602394 274 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms