Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 MTND5P19-201ENST00000424872 1794 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL355834.1-201ENST00000556602 3965 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 RNA5SP350-201ENST00000363298 111 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 RN7SKP237-201ENST00000364663 301 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-308P-201ENST00000390957 107 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC114491.1-201ENST00000416095 246 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL663061.1-201ENST00000416625 580 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC009302.1-201ENST00000417147 390 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL589794.1-201ENST00000424971 390 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 RPS26P11-201ENST00000463445 348 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC053481.1-201ENST00000467217 306 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC010683.1-201ENST00000473673 378 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 RPS26P6-201ENST00000475156 348 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 RPL23AP80-201ENST00000495605 424 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC135721.1-201ENST00000497954 479 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC011411.1-201ENST00000509592 876 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 OR5D15P-201ENST00000531671 942 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC063949.1-201ENST00000552900 865 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AF038458.1-201ENST00000588406 262 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL670379.11-201ENST00000604059 253 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL670379.10-201ENST00000604330 253 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC124312.5-201ENST00000604451 268 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL670379.12-201ENST00000605291 253 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AL670379.9-201ENST00000605428 253 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 MIR6889-201ENST00000613185 59 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC087894.3-201ENST00000623682 349 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 CDY19P-201ENST00000411668 1613 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 CDY18P-201ENST00000438294 1609 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 DNM1P47-203ENST00000571780 12667 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 Y_RNA.135-201ENST00000363439 95 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AL031985.1-201ENST00000392713 418 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AL121834.1-202ENST00000404494 277 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 RN7SKP148-201ENST00000410179 275 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC005019.1-201ENST00000436455 431 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 RPL21P8-201ENST00000465083 535 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 RN7SL149P-201ENST00000465197 281 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC083806.1-201ENST00000468934 316 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 RN7SL187P-201ENST00000495587 303 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AP005639.1-201ENST00000526939 192 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC135001.1-201ENST00000544546 283 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms