Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 NOP56P3-201ENST00000549457 385 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 AC243654.2-201ENST00000612843 443 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 AC069209.1-201ENST00000619282 651 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC073073.2-201ENST00000609827 2578 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 RNA5SP235-201ENST00000365411 114 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 HSPE1P26-201ENST00000405341 275 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AL445189.1-201ENST00000405722 338 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 CYCSP19-201ENST00000411715 316 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AL035423.1-201ENST00000420331 213 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AL160175.1-201ENST00000428124 247 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 MTND5P8-201ENST00000449817 1083 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AL513343.1-201ENST00000451818 792 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC025459.1-201ENST00000504072 156 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 RNU2-27P-201ENST00000516185 142 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC026616.1-201ENST00000523157 525 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 HAUS1P3-201ENST00000523909 662 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC106785.1-201ENST00000565935 262 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC005972.3-201ENST00000606304 481 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC239803.2-201ENST00000610161 430 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AP004607.9-201ENST00000618202 316 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC119674.1-207ENST00000641355 633 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 AC005183.1-201ENST00000603687 1979 ntBASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC65Q8IXS2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 ZNF826P-207ENST00000622273 1910 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 RNU1-64P-201ENST00000365443 163 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 NPM1P10-201ENST00000398310 865 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 RPL31P45-201ENST00000419532 356 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 CR848007.2-201ENST00000424918 787 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AL445584.1-201ENST00000431451 330 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AC074367.1-201ENST00000438685 1125 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 RPL23AP12-201ENST00000467573 473 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 BNIP3P5-201ENST00000562290 498 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AC139769.3-201ENST00000618383 175 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 AP003355.3-201ENST00000623465 114 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 MFSD8-236ENST00000641509 4050 ntBASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC65Q8IXS2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
CCDC65Q8IXS2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC65Q8IXS2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 SNORD9-201ENST00000362566 104 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 RPL21P17-201ENST00000397467 475 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 RN7SKP202-201ENST00000410439 330 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 MTND4P22-201ENST00000413116 1169 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms