Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RPSAP51-201ENST00000497462 645 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC098799.3-201ENST00000506095 438 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 NDUFB5P1-201ENST00000508134 564 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC138866.2-201ENST00000508650 584 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC005741.1-201ENST00000511094 432 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 RN7SKP288-201ENST00000516227 268 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC139365.2-201ENST00000517972 253 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 NMNAT1P1-201ENST00000554095 876 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 MIR4742-201ENST00000581069 85 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 CTHRC1P1-201ENST00000605383 469 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC080078.3-201ENST00000605407 463 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AL080274.1-201ENST00000605565 220 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AL133481.2-203ENST00000607558 139 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC093913.1-201ENST00000614178 329 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 CU639417.4-201ENST00000623928 207 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC090617.10-201ENST00000624308 134 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC231657.1-201ENST00000624313 397 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 SPATA2P1-201ENST00000431223 2055 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 MTND4P35-201ENST00000604257 1375 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 GTF2H2B-203ENST00000508065 1432 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF43Q68DV7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 RN7SKP115-201ENST00000363177 317 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 RN7SKP145-201ENST00000363291 303 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 RN7SKP124-201ENST00000364730 341 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AL390316.1-201ENST00000406279 553 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC079809.1-201ENST00000415468 276 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 MTCO2P27-201ENST00000420740 428 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 SNRPEP4-201ENST00000435815 279 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 RPL17P49-201ENST00000443728 411 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 EEF1B2P6-201ENST00000445713 673 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 COPS8P2-201ENST00000473228 627 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 RN7SL860P-201ENST00000473738 223 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC022215.1-201ENST00000481770 362 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 RN7SL570P-201ENST00000484405 292 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AF213884.1-201ENST00000488102 463 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 RN7SL184P-201ENST00000488308 297 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 RN7SL30P-201ENST00000488416 306 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 MRPS16P1-201ENST00000523462 412 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 GTF2IP11-201ENST00000526931 420 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 FRG2DP-202ENST00000566967 323 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 MIR4260-201ENST00000583107 67 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC024940.4-201ENST00000605507 246 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC018690.1-201ENST00000608144 626 ntBASIC5.94□□□□□ -1.46
RNF43Q68DV7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF43Q68DV7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms