Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL035413.2-201ENST00000604801 525 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AL732372.2-225ENST00000642124 456 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 OR51C1P-202ENST00000641159 1444 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AL450338.1-201ENST00000407987 512 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 TRGV5P-201ENST00000419915 354 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 ARL5AP4-201ENST00000430731 512 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AC008264.1-201ENST00000447612 367 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 ELOCP23-201ENST00000452014 332 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AC078785.3-201ENST00000476607 425 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AC017037.1-201ENST00000508460 471 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 APOOP4-201ENST00000513530 597 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 BRDTP1-201ENST00000605735 677 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AC026790.2-201ENST00000606282 430 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AC100793.4-201ENST00000613683 429 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AC241585.2-209ENST00000638217 143 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 AC009487.2-201ENST00000420969 6821 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.06□□□□□ -1.92
RIF1Q5UIP0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RIF1Q5UIP0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 RNU6-482P-201ENST00000391068 107 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 AC092447.2-201ENST00000435487 669 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 MIR4648-201ENST00000580107 72 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 AC010503.3-201ENST00000594355 540 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 AC015849.2-201ENST00000605738 409 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 MIR764-201ENST00000390811 85 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 DPPA2P2-201ENST00000418220 897 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 DYNLL1P7-201ENST00000429273 258 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 NPM1P28-201ENST00000492269 840 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 IGKV3-31-201ENST00000523109 329 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 AC106785.3-201ENST00000564064 847 ntBASIC3.05□□□□□ -1.92
RIF1Q5UIP0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RIF1Q5UIP0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 MIR9-1-201ENST00000385198 89 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AC108210.2-201ENST00000503681 201 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 MIR5047-201ENST00000579212 100 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AC016727.1-205ENST00000605437 569 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AC004832.5-201ENST00000608677 401 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AC092079.1-201ENST00000558620 1985 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AL356968.1-201ENST00000416622 474 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 MTCO1P51-201ENST00000427672 1060 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 FTLP19-201ENST00000433300 394 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 RN7SL20P-201ENST00000488827 297 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AC015871.5-202ENST00000623252 701 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 AC017002.4-201ENST00000604721 1525 ntBASIC3.04□□□□□ -1.92
RIF1Q5UIP0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.04□□□□□ -1.92
RIF1Q5UIP0 RNA5SP68-201ENST00000363885 119 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 RN7SKP223-201ENST00000410582 62 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AL135786.1-201ENST00000415892 214 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 FTH1P6-201ENST00000430768 320 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 RPS4XP22-201ENST00000480755 780 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AC109329.2-201ENST00000519658 482 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 MIR3936-201ENST00000584304 110 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms