Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDS5AQ29RF7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDS5AQ29RF7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC018529.3-201ENST00000624212 2254 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 MIR200C-201ENST00000384980 68 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 RNU6-244P-201ENST00000391028 104 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC104297.1-201ENST00000393779 870 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 JKAMPP1-201ENST00000413804 919 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 VPS26BP1-201ENST00000417155 755 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC004552.1-201ENST00000419089 348 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 OR6K4P-201ENST00000423179 955 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 HSFY3P-201ENST00000444242 1191 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 SEPT14P24-201ENST00000447236 180 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AL451050.1-201ENST00000450126 415 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 RPS26P3-201ENST00000470205 348 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC090543.2-201ENST00000483963 348 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC004057.1-201ENST00000485827 348 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 RPS26P15-201ENST00000488067 348 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 VWA8P1-201ENST00000510889 176 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 RAC1P2-201ENST00000511164 579 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 RNU6-311P-201ENST00000516224 102 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC090281.1-201ENST00000523019 276 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AL390816.3-201ENST00000604527 1066 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AL354760.1-201ENST00000608357 643 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AL135786.2-201ENST00000608422 615 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC011472.4-201ENST00000615848 491 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC009159.2-201ENST00000617603 606 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 FRG1HP-204ENST00000617940 757 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 AC073569.3-201ENST00000619055 682 ntBASIC4.59□□□□□ -1.67
PDS5AQ29RF7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDS5AQ29RF7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDS5AQ29RF7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 METTL21EP-201ENST00000298105 713 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 RNU6-666P-201ENST00000363499 107 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 RNA5SP27-201ENST00000363839 119 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 ATP5A1P2-201ENST00000412323 255 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC096638.2-201ENST00000434965 711 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 MTND1P31-201ENST00000449206 961 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 RPS6P4-201ENST00000494693 758 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 RPL21P131-201ENST00000497298 483 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC006499.5-201ENST00000505037 514 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC113420.1-201ENST00000507903 571 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC022022.2-201ENST00000602989 360 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 MRPS35P3-201ENST00000603189 709 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC024060.1-201ENST00000607052 494 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC009464.1-201ENST00000615731 469 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC233309.1-201ENST00000619522 751 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 Z99129.2-201ENST00000619967 314 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC079684.1-201ENST00000621405 437 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC006840.1-201ENST00000623069 542 ntBASIC4.58□□□□□ -1.68
PDS5AQ29RF7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDS5AQ29RF7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.57□□□□□ -1.68
PDS5AQ29RF7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms