Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.78□□□□□ -1.8
TPM4P67936 AC012065.2-201ENST00000421295 375 ntBASIC3.78□□□□□ -1.8
TPM4P67936 AC012498.1-201ENST00000424037 437 ntBASIC3.78□□□□□ -1.8
TPM4P67936 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.78□□□□□ -1.8
TPM4P67936 CYCSP43-201ENST00000438233 310 ntBASIC3.78□□□□□ -1.8
TPM4P67936 VN1R48P-201ENST00000448149 1036 ntBASIC3.78□□□□□ -1.8
TPM4P67936 Z99127.3-201ENST00000448158 395 ntBASIC3.78□□□□□ -1.8
TPM4P67936 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.78□□□□□ -1.8
TPM4P67936 GAPDHP36-201ENST00000480688 918 ntBASIC3.78□□□□□ -1.8
TPM4P67936 RN7SL283P-201ENST00000489055 303 ntBASIC3.78□□□□□ -1.8
TPM4P67936 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.78□□□□□ -1.8
TPM4P67936 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.78□□□□□ -1.8
TPM4P67936 CCNHP1-201ENST00000513311 678 ntBASIC3.78□□□□□ -1.8
TPM4P67936 ACTR6P1-201ENST00000514311 1104 ntBASIC3.78□□□□□ -1.8
TPM4P67936 RN7SKP122-201ENST00000515923 296 ntBASIC3.78□□□□□ -1.8
TPM4P67936 RNA5SP217-201ENST00000515959 91 ntBASIC3.78□□□□□ -1.8
TPM4P67936 SEC11B-201ENST00000518383 499 ntBASIC3.78□□□□□ -1.8
TPM4P67936 HIGD1AP18-201ENST00000520730 278 ntBASIC3.78□□□□□ -1.8
TPM4P67936 AC245166.1-201ENST00000521012 253 ntBASIC3.78□□□□□ -1.8
TPM4P67936 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.78□□□□□ -1.8
TPM4P67936 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.78□□□□□ -1.8
TPM4P67936 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.78□□□□□ -1.8
TPM4P67936 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.78□□□□□ -1.8
TPM4P67936 AC121761.2-201ENST00000617300 689 ntBASIC3.78□□□□□ -1.8
TPM4P67936 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.78□□□□□ -1.8
TPM4P67936 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TPM4P67936 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
TPM4P67936 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TPM4P67936 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TPM4P67936 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TPM4P67936 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.77□□□□□ -1.81
TPM4P67936 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.77□□□□□ -1.81
TPM4P67936 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TPM4P67936 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TPM4P67936 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TPM4P67936 SNORD9-201ENST00000362566 104 ntBASIC3.77□□□□□ -1.81
TPM4P67936 SNORA31-201ENST00000362607 130 ntBASIC3.77□□□□□ -1.81
TPM4P67936 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TPM4P67936 MIR585-201ENST00000384887 94 ntBASIC3.77□□□□□ -1.81
TPM4P67936 RNU6-244P-201ENST00000391028 104 ntBASIC3.77□□□□□ -1.81
TPM4P67936 RNA5SP44-201ENST00000410446 133 ntBASIC3.77□□□□□ -1.81
TPM4P67936 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM4P67936 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.77□□□□□ -1.81
TPM4P67936 AC006960.1-201ENST00000419980 153 ntBASIC3.77□□□□□ -1.81
TPM4P67936 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.77□□□□□ -1.81
TPM4P67936 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.77□□□□□ -1.81
TPM4P67936 RPS24P8-201ENST00000431490 402 ntBASIC3.77□□□□□ -1.81
TPM4P67936 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM4P67936 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.77□□□□□ -1.81
TPM4P67936 CST9LP2-201ENST00000437612 320 ntBASIC3.77□□□□□ -1.81
TPM4P67936 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM4P67936 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.77□□□□□ -1.81
TPM4P67936 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM4P67936 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM4P67936 SNORD105B-201ENST00000458770 79 ntBASIC3.77□□□□□ -1.81
TPM4P67936 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.77□□□□□ -1.81
TPM4P67936 MTCO1P35-201ENST00000515270 228 ntBASIC3.77□□□□□ -1.81
TPM4P67936 RN7SKP234-201ENST00000517173 224 ntBASIC3.77□□□□□ -1.81
TPM4P67936 IGKV2D-10-201ENST00000520194 281 ntBASIC3.77□□□□□ -1.81
TPM4P67936 IGKV2D-19-201ENST00000523346 262 ntBASIC3.77□□□□□ -1.81
TPM4P67936 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TPM4P67936 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM4P67936 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.77□□□□□ -1.81
TPM4P67936 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.77□□□□□ -1.81
TPM4P67936 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM4P67936 AC015917.1-201ENST00000579654 510 ntBASIC3.77□□□□□ -1.81
TPM4P67936 AC010591.1-201ENST00000603941 649 ntBASIC3.77□□□□□ -1.81
TPM4P67936 MIR7973-1-201ENST00000614683 76 ntBASIC3.77□□□□□ -1.81
TPM4P67936 SNORD39.4-201ENST00000620099 78 ntBASIC3.77□□□□□ -1.81
TPM4P67936 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.77□□□□□ -1.81
TPM4P67936 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.77□□□□□ -1.81
TPM4P67936 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TPM4P67936 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.77□□□□□ -1.81
TPM4P67936 ELL2P4-201ENST00000446870 1376 ntBASIC3.76□□□□□ -1.81
TPM4P67936 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.76□□□□□ -1.81
TPM4P67936 USP8P1-201ENST00000494673 3183 ntBASIC3.76□□□□□ -1.81
TPM4P67936 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TPM4P67936 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TPM4P67936 NDUFB4P5-201ENST00000415445 361 ntBASIC3.76□□□□□ -1.81
TPM4P67936 BTF3P9-201ENST00000418784 283 ntBASIC3.76□□□□□ -1.81
TPM4P67936 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.76□□□□□ -1.81
TPM4P67936 UBE2V2P1-201ENST00000434717 398 ntBASIC3.76□□□□□ -1.81
TPM4P67936 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.76□□□□□ -1.81
TPM4P67936 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.76□□□□□ -1.81
TPM4P67936 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.76□□□□□ -1.81
TPM4P67936 AC112198.1-201ENST00000505369 1220 ntBASIC3.76□□□□□ -1.81
TPM4P67936 AC110792.2-201ENST00000510278 224 ntBASIC3.76□□□□□ -1.81
TPM4P67936 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.76□□□□□ -1.81
TPM4P67936 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.76□□□□□ -1.81
TPM4P67936 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.76□□□□□ -1.81
TPM4P67936 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.76□□□□□ -1.81
TPM4P67936 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.76□□□□□ -1.81
TPM4P67936 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.76□□□□□ -1.81
TPM4P67936 AC115085.1-201ENST00000588924 229 ntBASIC3.76□□□□□ -1.81
TPM4P67936 AC069304.3-201ENST00000603938 1084 ntBASIC3.76□□□□□ -1.81
TPM4P67936 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.76□□□□□ -1.81
TPM4P67936 MIR8058-201ENST00000615737 89 ntBASIC3.76□□□□□ -1.81
TPM4P67936 XIST_intron.1-201ENST00000619444 68 ntBASIC3.76□□□□□ -1.81
TPM4P67936 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TPM4P67936 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms