Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGCS2P54868 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 AC106785.3-201ENST00000564064 847 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AC233266.2-201ENST00000567067 528 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AC084824.5-201ENST00000612009 413 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGCS2P54868 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGCS2P54868 AL163051.2-201ENST00000618976 735 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AC097460.3-201ENST00000623099 442 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AP003355.3-201ENST00000623465 114 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS2P54868 AL359715.4-201ENST00000606629 1436 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HMGCS2P54868 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS2P54868 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGCS2P54868 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCS2P54868 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGCS2P54868 RNU6-532P-201ENST00000384318 107 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 MTHFD2P2-201ENST00000407725 247 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 RPL26P37-201ENST00000411983 438 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGCS2P54868 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGCS2P54868 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCS2P54868 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCS2P54868 MTND2P39-201ENST00000457230 764 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 RNU7-27P-201ENST00000459281 62 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 SNORA76.2-201ENST00000517095 137 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 IGKV2-26-201ENST00000518305 343 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGCS2P54868 AC092451.2-201ENST00000538746 658 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCS2P54868 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCS2P54868 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGCS2P54868 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGCS2P54868 HMGB3P26-201ENST00000560051 582 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGCS2P54868 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
HMGCS2P54868 AC012493.2-201ENST00000595083 291 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 BRDTP1-201ENST00000605735 677 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGCS2P54868 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCS2P54868 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGCS2P54868 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HMGCS2P54868 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGCS2P54868 OTUD4P1-201ENST00000237841 3067 ntBASIC4.09□□□□□ -1.75
HMGCS2P54868 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HMGCS2P54868 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.09□□□□□ -1.76
HMGCS2P54868 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HMGCS2P54868 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HMGCS2P54868 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.09□□□□□ -1.76
HMGCS2P54868 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS2P54868 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HMGCS2P54868 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HMGCS2P54868 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS2P54868 Y_RNA.111-201ENST00000363248 100 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 RNU6-792P-201ENST00000363490 107 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 RNU6-666P-201ENST00000363499 107 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS2P54868 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCS2P54868 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HMGCS2P54868 RN7SKP53-201ENST00000411337 315 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 AC017079.2-201ENST00000416102 485 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 OSTCP5-201ENST00000425293 453 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 AC073069.1-201ENST00000428657 441 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCS2P54868 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCS2P54868 AC091862.1-201ENST00000438016 1100 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCS2P54868 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCS2P54868 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS2P54868 RPL6P9-201ENST00000466502 859 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 MTND3P3-201ENST00000505004 126 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCS2P54868 VTA1P2-201ENST00000520205 911 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS2P54868 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS2P54868 AC004923.2-201ENST00000529649 369 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS2P54868 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGCS2P54868 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGCS2P54868 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS2P54868 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCS2P54868 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS2P54868 AC023158.1-201ENST00000561632 1025 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 AC079148.1-201ENST00000565944 819 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 AC022884.3-201ENST00000579571 248 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 AP003392.5-201ENST00000607857 415 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 AL096803.3-201ENST00000609032 532 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 MIR1264-201ENST00000616374 69 ntBASIC4.08□□□□□ -1.76
HMGCS2P54868 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HMGCS2P54868 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS2P54868 AL049555.1-201ENST00000562834 1933 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AL645937.1-201ENST00000641739 1652 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HMGCS2P54868 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms