Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.81□□□□□ -1.64
COPB1P53618 ACTG1P13-201ENST00000486987 1043 ntBASIC4.81□□□□□ -1.64
COPB1P53618 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.81□□□□□ -1.64
COPB1P53618 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
COPB1P53618 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 AC147055.4-201ENST00000504399 745 ntBASIC4.81□□□□□ -1.64
COPB1P53618 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COPB1P53618 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.81□□□□□ -1.64
COPB1P53618 HNRNPKP5-201ENST00000515300 253 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 IFITM8P-201ENST00000522529 394 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.81□□□□□ -1.64
COPB1P53618 AP001781.1-201ENST00000530977 207 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.81□□□□□ -1.64
COPB1P53618 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.81□□□□□ -1.64
COPB1P53618 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.81□□□□□ -1.64
COPB1P53618 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.81□□□□□ -1.64
COPB1P53618 ACTR3BP3-201ENST00000565577 979 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC119751.7-201ENST00000600494 245 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.81□□□□□ -1.64
COPB1P53618 AC103881.1-201ENST00000603476 538 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC133552.5-201ENST00000604266 540 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AP004247.3-201ENST00000608682 624 ntBASIC4.81□□□□□ -1.64
COPB1P53618 MIR378J-201ENST00000611988 109 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.81□□□□□ -1.64
COPB1P53618 AC026585.1-201ENST00000619582 524 ntBASIC4.81□□□□□ -1.64
COPB1P53618 MIR6810-201ENST00000622701 70 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AP000346.3-201ENST00000622821 210 ntBASIC4.81□□□□□ -1.64
COPB1P53618 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AF246928.1-201ENST00000623768 87 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AP003497.2-201ENST00000624220 967 ntBASIC4.81□□□□□ -1.64
COPB1P53618 MIR7641-1-201ENST00000627518 61 ntBASIC4.81□□□□□ -1.64
COPB1P53618 AC116618.1-201ENST00000634617 774 ntBASIC4.81□□□□□ -1.64
COPB1P53618 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.81□□□□□ -1.64
COPB1P53618 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.81□□□□□ -1.64
COPB1P53618 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPB1P53618 AC005539.1-201ENST00000443768 1479 ntBASIC4.81□□□□□ -1.64
COPB1P53618 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPB1P53618 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
COPB1P53618 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 CR381670.1-201ENST00000624291 1693 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC087190.4-201ENST00000574616 8334 ntBASIC4.8□□□□□ -1.64
COPB1P53618 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COPB1P53618 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.8□□□□□ -1.64
COPB1P53618 LINC01109-201ENST00000603837 3081 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC026951.1-201ENST00000559530 2459 ntBASIC4.8□□□□□ -1.64
COPB1P53618 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.8□□□□□ -1.64
COPB1P53618 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COPB1P53618 MIR513A2-201ENST00000385249 127 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AL031577.2-201ENST00000404133 280 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AL160275.2-201ENST00000412010 394 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.8□□□□□ -1.64
COPB1P53618 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.8□□□□□ -1.64
COPB1P53618 COX6CP17-201ENST00000421389 185 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC244035.1-201ENST00000430042 390 ntBASIC4.8□□□□□ -1.64
COPB1P53618 DLGAP5P1-201ENST00000430307 464 ntBASIC4.8□□□□□ -1.64
COPB1P53618 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.8□□□□□ -1.64
COPB1P53618 AP000936.3-201ENST00000438127 255 ntBASIC4.8□□□□□ -1.64
COPB1P53618 RPS7P5-201ENST00000441482 581 ntBASIC4.8□□□□□ -1.64
COPB1P53618 TPT1P12-201ENST00000448968 492 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC104306.1-201ENST00000449702 371 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.8□□□□□ -1.64
COPB1P53618 RPS29P33-201ENST00000456717 146 ntBASIC4.8□□□□□ -1.64
COPB1P53618 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.8□□□□□ -1.64
COPB1P53618 RN7SKP31-201ENST00000516354 278 ntBASIC4.8□□□□□ -1.64
COPB1P53618 RPL12P22-201ENST00000519073 490 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.8□□□□□ -1.64
COPB1P53618 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.8□□□□□ -1.64
COPB1P53618 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 RFPL1S-203ENST00000539579 330 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.8□□□□□ -1.64
COPB1P53618 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.8□□□□□ -1.64
COPB1P53618 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.8□□□□□ -1.64
COPB1P53618 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 AC011260.1-201ENST00000578420 472 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC006539.2-201ENST00000601729 572 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC233280.2-201ENST00000603917 1070 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC009220.3-201ENST00000604318 586 ntBASIC4.8□□□□□ -1.64
COPB1P53618 AC092653.1-201ENST00000608509 531 ntBASIC4.8□□□□□ -1.64
COPB1P53618 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.8□□□□□ -1.64
COPB1P53618 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.8□□□□□ -1.64
COPB1P53618 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.8□□□□□ -1.64
COPB1P53618 NOL8P1-201ENST00000508336 3529 ntBASIC4.8□□□□□ -1.64
COPB1P53618 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPB1P53618 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.8□□□□□ -1.64
COPB1P53618 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COPB1P53618 DDX18P3-201ENST00000404856 2007 ntBASIC4.8□□□□□ -1.64
COPB1P53618 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms