Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC006504.1-201ENST00000562493 3666 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1A1P48729 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1A1P48729 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 TAF9BP2-201ENST00000400856 499 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 EI24P1-201ENST00000416584 867 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC009263.1-201ENST00000441193 1239 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 HMGB1P48-201ENST00000446155 598 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC092685.1-201ENST00000447960 1243 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AL136097.1-201ENST00000456945 913 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 SNRPGP3-201ENST00000469405 227 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 RN7SKP21-201ENST00000516503 220 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 SNORA31.13-201ENST00000516624 135 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC093014.1-201ENST00000548926 724 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC006960.3-201ENST00000561845 705 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC087499.8-201ENST00000578406 226 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 VN1R85P-201ENST00000601587 426 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 NTAN1P1-201ENST00000603150 646 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AL034351.1-201ENST00000605288 668 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC018754.1-201ENST00000607486 925 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1A1P48729 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1A1P48729 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC079684.1-201ENST00000621405 437 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 AL163152.1-201ENST00000642001 374 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1A1P48729 GABPAP-201ENST00000419271 1356 ntBASIC3.33□□□□□ -1.88
CSNK1A1P48729 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1A1P48729 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSNK1A1P48729 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSNK1A1P48729 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSNK1A1P48729 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 OR4A15-201ENST00000314706 1035 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 RNU1-18P-201ENST00000363062 164 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 RNU6-252P-201ENST00000363232 107 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 PTMAP5-201ENST00000393073 333 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 RPL32P23-201ENST00000397237 405 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 EIF5P1-201ENST00000400019 1231 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 HMGB1P13-201ENST00000406019 642 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 MTATP6P31-201ENST00000406985 692 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 Z98941.1-201ENST00000407764 100 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSNK1A1P48729 XKRYP4-201ENST00000414395 483 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 LINC01347-201ENST00000417964 355 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 TCEA1P2-201ENST00000420496 906 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC241520.1-201ENST00000422654 1099 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AL139247.1-201ENST00000422768 325 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 RPS26P40-201ENST00000435209 294 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 CYCSP43-201ENST00000438233 310 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 RPL23AP33-201ENST00000442301 452 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC007000.2-201ENST00000442564 487 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 XKRYP5-201ENST00000449659 483 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC108729.2-201ENST00000476543 840 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AL049830.2-201ENST00000480072 201 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC093267.1-201ENST00000489176 961 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 SCARNA14-201ENST00000516903 136 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 AL121766.1-201ENST00000547436 487 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSNK1A1P48729 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 AL133457.1-201ENST00000564251 987 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC233266.2-201ENST00000567067 528 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 MIR5685-201ENST00000579080 79 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC010928.3-201ENST00000587712 541 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC011374.2-201ENST00000607135 526 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms