Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN6P29350 UBE2V1P6-201ENST00000430840 422 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 AC087650.1-201ENST00000431445 468 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 HMGB1P45-201ENST00000435986 653 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN6P29350 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN6P29350 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN6P29350 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.8□□□□□ -1.8
PTPN6P29350 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 HMGN2P7-201ENST00000456186 273 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN6P29350 RPL7P1-201ENST00000468161 747 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 RPL7P9-201ENST00000468715 747 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 RNA5SP315-201ENST00000516340 116 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 RNA5SP312-201ENST00000517068 116 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 MIR2116-201ENST00000517221 80 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 AF279873.1-201ENST00000523393 313 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN6P29350 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 AC090616.5-202ENST00000582111 297 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 AC010928.3-201ENST00000587712 541 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN6P29350 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN6P29350 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN6P29350 AC078880.5-201ENST00000617845 421 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN6P29350 IPO8P1-201ENST00000455509 3109 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN6P29350 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN6P29350 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
PTPN6P29350 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 MTND5P28-201ENST00000438005 1594 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 ZNF849P-201ENST00000594711 1566 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN6P29350 AL592494.2-201ENST00000425455 1548 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 AL133383.2-201ENST00000622958 2336 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 FAM35DP-201ENST00000323387 2712 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PTPN6P29350 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN6P29350 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN6P29350 MTND4P8-201ENST00000514997 1362 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN6P29350 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
PTPN6P29350 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN6P29350 SNORA63.3-201ENST00000362682 132 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 HMGB3P19-201ENST00000403971 560 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 RNU2-37P-201ENST00000410695 177 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN6P29350 AC108032.1-201ENST00000416706 207 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.79□□□□□ -1.8
PTPN6P29350 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN6P29350 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN6P29350 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN6P29350 MRPL50P1-201ENST00000431951 384 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN6P29350 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN6P29350 AC096638.2-201ENST00000434965 711 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC083863.1-201ENST00000438811 231 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC002542.1-201ENST00000440683 193 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN6P29350 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN6P29350 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN6P29350 FABP3P2-201ENST00000453169 399 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN6P29350 RPL9P32-201ENST00000464118 620 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC020898.1-201ENST00000474167 787 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTPN6P29350 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN6P29350 AC092451.1-201ENST00000480211 153 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 RN7SL604P-201ENST00000492589 296 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 RPL29P14-201ENST00000495837 428 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN6P29350 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN6P29350 PRELID3BP4-201ENST00000515476 571 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC104115.2-201ENST00000523026 687 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC124293.1-201ENST00000530034 493 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN6P29350 AC092451.2-201ENST00000538746 658 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN6P29350 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN6P29350 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN6P29350 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN6P29350 AC008687.2-201ENST00000597865 520 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AL390816.3-201ENST00000604527 1066 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN6P29350 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTPN6P29350 AC010608.2-201ENST00000624830 470 ntBASIC3.79□□□□□ -1.8
PTPN6P29350 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN6P29350 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN6P29350 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
PTPN6P29350 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN6P29350 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN6P29350 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN6P29350 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms