Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MTCO1P56-201ENST00000401674 224 ntBASIC4.12□□□□□ -1.75
CDH3P22223 RN7SKP56-201ENST00000410513 331 ntBASIC4.12□□□□□ -1.75
CDH3P22223 RN7SKP235-201ENST00000410662 305 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH3P22223 AC234782.4-201ENST00000417646 1048 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AC234064.1-201ENST00000436312 247 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH3P22223 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH3P22223 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH3P22223 RN7SL691P-201ENST00000494487 301 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 HPRT1P2-201ENST00000505250 544 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 MTATP6P22-201ENST00000507369 598 ntBASIC4.12□□□□□ -1.75
CDH3P22223 RNA5SP73-201ENST00000516744 108 ntBASIC4.12□□□□□ -1.75
CDH3P22223 OR10V3P-201ENST00000525712 725 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH3P22223 OR4C2P-201ENST00000530855 1064 ntBASIC4.12□□□□□ -1.75
CDH3P22223 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH3P22223 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH3P22223 AL132857.1-201ENST00000555180 708 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH3P22223 NIFKP8-201ENST00000560500 874 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AGGF1P5-201ENST00000567900 919 ntBASIC4.12□□□□□ -1.75
CDH3P22223 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH3P22223 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH3P22223 AC020910.2-201ENST00000603635 610 ntBASIC4.12□□□□□ -1.75
CDH3P22223 RNA5SP108-201ENST00000605921 117 ntBASIC4.12□□□□□ -1.75
CDH3P22223 FAM27D1-201ENST00000612308 341 ntBASIC4.12□□□□□ -1.75
CDH3P22223 VN1R74P-201ENST00000613259 503 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AC123767.1-202ENST00000620407 817 ntBASIC4.12□□□□□ -1.75
CDH3P22223 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 AL445363.3-201ENST00000623080 671 ntBASIC4.12□□□□□ -1.75
CDH3P22223 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 AC022031.1-201ENST00000585985 2593 ntBASIC4.12□□□□□ -1.75
CDH3P22223 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH3P22223 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH3P22223 EXOC5P1-201ENST00000510543 1969 ntBASIC4.12□□□□□ -1.75
CDH3P22223 DCAF13P1-201ENST00000495256 1330 ntBASIC4.12□□□□□ -1.75
CDH3P22223 ASNSP1-204ENST00000641977 1664 ntBASIC4.12□□□□□ -1.75
CDH3P22223 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH3P22223 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 LARP1BP1-201ENST00000506036 1359 ntBASIC4.12□□□□□ -1.75
CDH3P22223 ZNF962P-201ENST00000443465 3140 ntBASIC4.12□□□□□ -1.75
CDH3P22223 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH3P22223 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDH3P22223 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDH3P22223 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CDH3P22223 ZNF33CP-201ENST00000432492 2030 ntBASIC4.11□□□□□ -1.75
CDH3P22223 Y_RNA.578-201ENST00000390903 88 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AL161909.1-201ENST00000397390 712 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH3P22223 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH3P22223 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH3P22223 NANOGP5-201ENST00000424456 877 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH3P22223 AL009174.1-201ENST00000426577 416 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH3P22223 AC004975.1-201ENST00000428733 208 ntBASIC4.11□□□□□ -1.75
CDH3P22223 RPS27AP12-201ENST00000429552 465 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH3P22223 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH3P22223 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH3P22223 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH3P22223 MTCYBP42-201ENST00000444653 1130 ntBASIC4.11□□□□□ -1.75
CDH3P22223 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AC114755.5-201ENST00000447760 831 ntBASIC4.11□□□□□ -1.75
CDH3P22223 PPIAP3-201ENST00000450588 505 ntBASIC4.11□□□□□ -1.75
CDH3P22223 FABP3P2-201ENST00000453169 399 ntBASIC4.11□□□□□ -1.75
CDH3P22223 RPL23AP81-201ENST00000455252 467 ntBASIC4.11□□□□□ -1.75
CDH3P22223 RPL37P3-201ENST00000456825 293 ntBASIC4.11□□□□□ -1.75
CDH3P22223 HMGB3P30-201ENST00000457863 606 ntBASIC4.11□□□□□ -1.75
CDH3P22223 RPL7P19-201ENST00000469948 618 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AC015724.1-201ENST00000478577 156 ntBASIC4.11□□□□□ -1.75
CDH3P22223 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.11□□□□□ -1.75
CDH3P22223 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.11□□□□□ -1.75
CDH3P22223 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CDH3P22223 MTND1P24-201ENST00000552175 861 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH3P22223 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH3P22223 AC002487.1-201ENST00000604565 994 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AC012603.1-201ENST00000606424 528 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AC106052.1-201ENST00000608029 497 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AC007546.1-201ENST00000619452 559 ntBASIC4.11□□□□□ -1.75
CDH3P22223 MIR8059-201ENST00000620427 81 ntBASIC4.11□□□□□ -1.75
CDH3P22223 AC008993.2-201ENST00000631744 806 ntBASIC4.11□□□□□ -1.75
CDH3P22223 MAPK10-372ENST00000641954 3413 ntBASIC4.11□□□□□ -1.75
CDH3P22223 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH3P22223 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH3P22223 AC046144.1-201ENST00000478559 1853 ntBASIC4.11□□□□□ -1.75
CDH3P22223 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH3P22223 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH3P22223 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH3P22223 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH3P22223 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH3P22223 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH3P22223 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH3P22223 OR52E6-202ENST00000379946 954 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms