Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
COL5A1P20908 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.19□□□□□ -1.9
COL5A1P20908 AC105918.1-201ENST00000474399 838 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.19□□□□□ -1.9
COL5A1P20908 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.19□□□□□ -1.9
COL5A1P20908 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
COL5A1P20908 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.19□□□□□ -1.9
COL5A1P20908 AC090281.1-201ENST00000523019 276 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.19□□□□□ -1.9
COL5A1P20908 AC087888.1-201ENST00000550884 1254 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 AC141257.3-201ENST00000572906 215 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 AL008729.2-201ENST00000606393 473 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 TUG1_1.1-201ENST00000610654 145 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A1P20908 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL5A1P20908 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A1P20908 AL513302.2-201ENST00000562313 1842 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A1P20908 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
COL5A1P20908 AC062016.1-201ENST00000355719 319 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 EEF1A1P41-201ENST00000414667 207 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.18□□□□□ -1.9
COL5A1P20908 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.18□□□□□ -1.9
COL5A1P20908 BX276092.4-201ENST00000452056 248 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 RPS3AP43-201ENST00000479743 781 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 AC008885.1-201ENST00000514930 301 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 KCTD9P6-201ENST00000522306 950 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.18□□□□□ -1.9
COL5A1P20908 AC106785.3-201ENST00000564064 847 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.18□□□□□ -1.9
COL5A1P20908 AL356321.1-201ENST00000621360 228 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 AC009950.2-201ENST00000636548 183 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 AL031985.3-201ENST00000565390 2449 ntBASIC3.18□□□□□ -1.9
COL5A1P20908 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A1P20908 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
COL5A1P20908 HSPA8P17-201ENST00000427029 1382 ntBASIC3.17□□□□□ -1.9
COL5A1P20908 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL5A1P20908 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.17□□□□□ -1.9
COL5A1P20908 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL5A1P20908 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL5A1P20908 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
COL5A1P20908 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
COL5A1P20908 AL138885.1-201ENST00000405921 675 ntBASIC3.17□□□□□ -1.9
COL5A1P20908 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.17□□□□□ -1.9
COL5A1P20908 RPS12P5-201ENST00000423449 371 ntBASIC3.17□□□□□ -1.9
COL5A1P20908 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.17□□□□□ -1.9
COL5A1P20908 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.17□□□□□ -1.9
COL5A1P20908 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.17□□□□□ -1.9
COL5A1P20908 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
COL5A1P20908 AC068724.1-201ENST00000487100 792 ntBASIC3.17□□□□□ -1.9
COL5A1P20908 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL5A1P20908 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.17□□□□□ -1.9
COL5A1P20908 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.17□□□□□ -1.9
COL5A1P20908 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.17□□□□□ -1.9
COL5A1P20908 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.17□□□□□ -1.9
COL5A1P20908 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.17□□□□□ -1.9
COL5A1P20908 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
COL5A1P20908 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
COL5A1P20908 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.17□□□□□ -1.9
COL5A1P20908 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL5A1P20908 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
COL5A1P20908 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.17□□□□□ -1.9
COL5A1P20908 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.17□□□□□ -1.9
COL5A1P20908 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL5A1P20908 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
COL5A1P20908 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
COL5A1P20908 CR383658.2-201ENST00000547576 1525 ntBASIC3.17□□□□□ -1.9
COL5A1P20908 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
COL5A1P20908 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL5A1P20908 RNU6-283P-201ENST00000364788 107 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 RNA5SP31-201ENST00000411144 127 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL5A1P20908 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.16□□□□□ -1.9
COL5A1P20908 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.16□□□□□ -1.9
COL5A1P20908 AC005002.1-201ENST00000447458 540 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.16□□□□□ -1.9
COL5A1P20908 RPL7P47-201ENST00000497299 556 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.16□□□□□ -1.9
COL5A1P20908 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.16□□□□□ -1.9
COL5A1P20908 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.16□□□□□ -1.9
COL5A1P20908 RNA5SP356-201ENST00000515972 94 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 COX6B1P6-201ENST00000522347 255 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
COL5A1P20908 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.16□□□□□ -1.9
COL5A1P20908 MIR3162-201ENST00000581818 82 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 AC079791.1-201ENST00000605356 973 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.16□□□□□ -1.9
COL5A1P20908 SYT14P1-202ENST00000600441 1448 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL5A1P20908 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL5A1P20908 OR56A5-201ENST00000340110 738 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 AP002088.1-201ENST00000382740 395 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 RPL23AP48-201ENST00000406913 488 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 AC012065.2-201ENST00000421295 375 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.16□□□□□ -1.9
COL5A1P20908 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.16□□□□□ -1.9
COL5A1P20908 RPL35AP12-201ENST00000425362 338 ntBASIC3.16□□□□□ -1.9
COL5A1P20908 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.16□□□□□ -1.9
COL5A1P20908 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms