Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC020914.7-201ENST00000594477 545 ntBASIC6.93□□□□□ -1.3
COL9A1P20849 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.93□□□□□ -1.3
COL9A1P20849 Z83818.1-201ENST00000603584 150 ntBASIC6.93□□□□□ -1.3
COL9A1P20849 AC073657.2-201ENST00000605661 303 ntBASIC6.93□□□□□ -1.3
COL9A1P20849 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.93□□□□□ -1.3
COL9A1P20849 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.93□□□□□ -1.3
COL9A1P20849 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.93□□□□□ -1.3
COL9A1P20849 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL9A1P20849 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
COL9A1P20849 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC6.93□□□□□ -1.3
COL9A1P20849 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL9A1P20849 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
COL9A1P20849 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.93□□□□□ -1.3
COL9A1P20849 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL9A1P20849 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL9A1P20849 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL9A1P20849 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL9A1P20849 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL9A1P20849 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL9A1P20849 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.93□□□□□ -1.3
COL9A1P20849 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.93□□□□□ -1.3
COL9A1P20849 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.92□□□□□ -1.3
COL9A1P20849 HSPA8P1-201ENST00000425843 1833 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 AC083806.2-201ENST00000617795 2685 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 RN7SKP160-201ENST00000363804 340 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 RN7SKP292-201ENST00000365522 317 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL9A1P20849 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 AC008753.1-201ENST00000423096 284 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AC092162.1-201ENST00000432828 434 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 DAP3P1-201ENST00000441522 278 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 EEF1B2P6-201ENST00000445713 673 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.92□□□□□ -1.3
COL9A1P20849 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6.92□□□□□ -1.3
COL9A1P20849 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 GLRXP3-201ENST00000470810 321 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AL049830.2-201ENST00000480072 201 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.92□□□□□ -1.3
COL9A1P20849 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 RNU6-479P-201ENST00000516348 105 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.92□□□□□ -1.3
COL9A1P20849 AC009643.1-201ENST00000532030 391 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AC024405.2-202ENST00000532731 184 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.92□□□□□ -1.3
COL9A1P20849 AC009852.2-201ENST00000567898 485 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AL670379.6-201ENST00000603753 252 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AC006363.1-201ENST00000603806 463 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AL670379.1-201ENST00000604752 252 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AL590032.1-201ENST00000604920 252 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AC114477.1-201ENST00000605097 605 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AL670379.5-201ENST00000605253 252 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AL670379.8-201ENST00000605353 252 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AL670379.7-201ENST00000605823 252 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.92□□□□□ -1.3
COL9A1P20849 RNA5SP440-201ENST00000612665 119 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.92□□□□□ -1.3
COL9A1P20849 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.92□□□□□ -1.3
COL9A1P20849 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
COL9A1P20849 PHF2P2-202ENST00000444553 2865 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL9A1P20849 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.92□□□□□ -1.3
COL9A1P20849 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
COL9A1P20849 C4BPAP1-201ENST00000415474 1893 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
COL9A1P20849 AC009948.5-201ENST00000624360 4406 ntBASIC6.92□□□□□ -1.3
COL9A1P20849 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL9A1P20849 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL9A1P20849 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL9A1P20849 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
COL9A1P20849 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC6.91□□□□□ -1.3
COL9A1P20849 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL9A1P20849 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL9A1P20849 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
COL9A1P20849 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.91□□□□□ -1.3
COL9A1P20849 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.91□□□□□ -1.3
COL9A1P20849 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL9A1P20849 TATDN2P3-201ENST00000452855 3665 ntBASIC6.91□□□□□ -1.3
COL9A1P20849 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.91□□□□□ -1.3
COL9A1P20849 AL023806.3-201ENST00000638502 2704 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms