Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AL450992.3-201ENST00000413192 568 ntBASIC4.14□□□□□ -1.75
MSH3P20585 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH3P20585 OR4K6P-201ENST00000416478 897 ntBASIC4.14□□□□□ -1.75
MSH3P20585 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH3P20585 AC010099.3-201ENST00000423896 409 ntBASIC4.14□□□□□ -1.75
MSH3P20585 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.14□□□□□ -1.75
MSH3P20585 MOB1AP1-201ENST00000430903 535 ntBASIC4.14□□□□□ -1.75
MSH3P20585 AC092809.1-201ENST00000441469 474 ntBASIC4.14□□□□□ -1.75
MSH3P20585 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.14□□□□□ -1.75
MSH3P20585 AL451050.1-201ENST00000450126 415 ntBASIC4.14□□□□□ -1.75
MSH3P20585 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH3P20585 RAD23BP3-201ENST00000454157 1152 ntBASIC4.14□□□□□ -1.75
MSH3P20585 BX248409.1-201ENST00000455497 255 ntBASIC4.14□□□□□ -1.75
MSH3P20585 AC006517.1-201ENST00000480485 328 ntBASIC4.14□□□□□ -1.75
MSH3P20585 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.14□□□□□ -1.75
MSH3P20585 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH3P20585 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH3P20585 MRPL49P2-201ENST00000521066 465 ntBASIC4.14□□□□□ -1.75
MSH3P20585 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH3P20585 IGJP1-201ENST00000522682 475 ntBASIC4.14□□□□□ -1.75
MSH3P20585 UBTFL10-201ENST00000528532 562 ntBASIC4.14□□□□□ -1.75
MSH3P20585 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH3P20585 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH3P20585 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH3P20585 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.14□□□□□ -1.75
MSH3P20585 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.14□□□□□ -1.75
MSH3P20585 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH3P20585 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.14□□□□□ -1.75
MSH3P20585 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH3P20585 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH3P20585 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH3P20585 VN1R83P-201ENST00000595685 445 ntBASIC4.14□□□□□ -1.75
MSH3P20585 AC091057.2-201ENST00000602594 792 ntBASIC4.14□□□□□ -1.75
MSH3P20585 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH3P20585 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH3P20585 AC023043.4-201ENST00000612081 449 ntBASIC4.14□□□□□ -1.75
MSH3P20585 AP002782.1-201ENST00000623107 614 ntBASIC4.14□□□□□ -1.75
MSH3P20585 AP006248.2-201ENST00000623309 592 ntBASIC4.14□□□□□ -1.75
MSH3P20585 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
MSH3P20585 AC009951.1-201ENST00000623674 2614 ntBASIC4.14□□□□□ -1.75
MSH3P20585 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.14□□□□□ -1.75
MSH3P20585 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.14□□□□□ -1.75
MSH3P20585 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MSH3P20585 AL133412.1-201ENST00000380194 2992 ntBASIC4.14□□□□□ -1.75
MSH3P20585 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH3P20585 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MSH3P20585 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.13□□□□□ -1.75
MSH3P20585 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
MSH3P20585 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MSH3P20585 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MSH3P20585 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
MSH3P20585 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MSH3P20585 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MSH3P20585 ZNF876P-202ENST00000398732 1485 ntBASIC4.13□□□□□ -1.75
MSH3P20585 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.13□□□□□ -1.75
MSH3P20585 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
MSH3P20585 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MSH3P20585 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
MSH3P20585 ERHP2-201ENST00000402323 299 ntBASIC4.13□□□□□ -1.75
MSH3P20585 MTCO2P31-201ENST00000402702 684 ntBASIC4.13□□□□□ -1.75
MSH3P20585 RNU6-575P-201ENST00000411326 105 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AC107081.1-201ENST00000414975 361 ntBASIC4.13□□□□□ -1.75
MSH3P20585 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.13□□□□□ -1.75
MSH3P20585 AC234779.1-201ENST00000425910 285 ntBASIC4.13□□□□□ -1.75
MSH3P20585 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.13□□□□□ -1.75
MSH3P20585 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.13□□□□□ -1.75
MSH3P20585 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 RPS7P5-201ENST00000441482 581 ntBASIC4.13□□□□□ -1.75
MSH3P20585 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.13□□□□□ -1.75
MSH3P20585 NDUFS5P3-201ENST00000450668 321 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AC233982.1-201ENST00000451247 436 ntBASIC4.13□□□□□ -1.75
MSH3P20585 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MSH3P20585 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.13□□□□□ -1.75
MSH3P20585 PRDX3P4-201ENST00000470828 747 ntBASIC4.13□□□□□ -1.75
MSH3P20585 RPL23AP2-201ENST00000471227 466 ntBASIC4.13□□□□□ -1.75
MSH3P20585 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 AC113347.3-201ENST00000509113 148 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AC018797.3-201ENST00000513388 1241 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AC119751.5-201ENST00000514077 770 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 AC010306.1-201ENST00000523223 1117 ntBASIC4.13□□□□□ -1.75
MSH3P20585 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MSH3P20585 AP001636.2-201ENST00000525517 696 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.13□□□□□ -1.75
MSH3P20585 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 AC044913.1-201ENST00000557200 430 ntBASIC4.13□□□□□ -1.75
MSH3P20585 NIFKP8-201ENST00000560500 874 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AC022655.2-201ENST00000577280 318 ntBASIC4.13□□□□□ -1.75
MSH3P20585 MIR4666A-201ENST00000580160 79 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH3P20585 PCNAP1-202ENST00000595299 752 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AC068790.5-201ENST00000602741 355 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AP000238.1-201ENST00000608759 426 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AL592148.2-201ENST00000612210 372 ntBASIC4.13□□□□□ -1.75
MSH3P20585 AC078899.5-201ENST00000612475 178 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms