Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RPL11P3-201ENST00000395256 523 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 HSPA8P15-201ENST00000401676 786 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AL121972.1-201ENST00000402023 252 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 FAR2P2-201ENST00000413041 594 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 FAR2P4-202ENST00000425399 584 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 FHP1-201ENST00000442741 703 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC092647.2-201ENST00000452998 253 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 ATP5LP5-201ENST00000483050 299 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 RPL39P36-201ENST00000490784 156 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 CEACAMP10-202ENST00000495431 496 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC110792.2-201ENST00000510278 224 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 RNA5SP373-201ENST00000517271 95 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 SOD1P3-201ENST00000518682 454 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 NACA-211ENST00000548563 827 ntTSL 5 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AL512360.1-201ENST00000555346 234 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AL359212.1-201ENST00000556608 614 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC079075.1-201ENST00000559543 878 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 SULT1C2P1-202ENST00000562418 459 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AL133255.1-201ENST00000606374 441 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AP001506.1-201ENST00000615444 211 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 uc_338.18-201ENST00000615451 175 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AL122125.1-201ENST00000616999 600 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 USP9YP4-201ENST00000424401 1745 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC012618.3-205ENST00000637896 1496 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC009313.2-201ENST00000417893 1941 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AL121886.1-201ENST00000358609 435 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 MIR606-201ENST00000384851 96 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 Z97832.1-201ENST00000402490 328 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 Y_RNA.598-201ENST00000410480 95 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 PDCL2P1-201ENST00000419302 352 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC018644.1-201ENST00000429934 551 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 RPL12P17-201ENST00000432393 498 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AL590399.4-201ENST00000436561 601 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 RPL7P11-201ENST00000437586 658 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 HMGB3P9-201ENST00000441799 583 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 TPT1P13-201ENST00000449760 499 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 FABP3P2-201ENST00000453169 399 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AL354710.1-201ENST00000453641 246 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 RPL12P39-201ENST00000455456 496 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC012170.1-201ENST00000495139 359 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 HMGB1P29-201ENST00000505659 499 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC093809.1-201ENST00000509155 340 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC013828.2-201ENST00000532487 235 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC018552.1-201ENST00000562099 811 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 SNORD39.3-201ENST00000584451 71 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AC074140.1-201ENST00000621617 208 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 AL078621.3-201ENST00000623707 2042 ntBASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CSB-PGBD3P0DP91 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms