Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 LINC01109-201ENST00000603837 3081 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 AC008079.2-201ENST00000623543 20396 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 AL079305.1-201ENST00000623159 3008 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 RNU6-636P-201ENST00000384598 107 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 SNORA11.2-201ENST00000408318 127 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 ELOCP17-201ENST00000414751 326 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.13□□□□□ -1.59
COL3A1P02461 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.13□□□□□ -1.59
COL3A1P02461 AL365203.2-201ENST00000423444 196 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.13□□□□□ -1.59
COL3A1P02461 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.13□□□□□ -1.59
COL3A1P02461 SRRM1P2-201ENST00000464531 1192 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AL139099.1-201ENST00000497398 403 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 HMGB1P47-201ENST00000511281 589 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 FABP5P12-201ENST00000515543 389 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.13□□□□□ -1.59
COL3A1P02461 AP000889.1-201ENST00000530968 660 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 CYCSP30-201ENST00000546447 172 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC008015.1-201ENST00000555505 465 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC090877.1-201ENST00000561418 344 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 AC125494.3-201ENST00000602759 455 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 DPRXP5-201ENST00000604662 539 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 TUSC7.1-201ENST00000610969 165 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC087241.4-201ENST00000612441 480 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 AC099669.2-201ENST00000616549 437 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AL008636.1-201ENST00000625038 1018 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL3A1P02461 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL3A1P02461 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
COL3A1P02461 AC073544.1-201ENST00000600110 1595 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL3A1P02461 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL3A1P02461 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.12□□□□□ -1.59
COL3A1P02461 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL3A1P02461 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL3A1P02461 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL3A1P02461 RNA5SP387-201ENST00000364226 106 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 RNA5SP97-201ENST00000365006 84 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.12□□□□□ -1.59
COL3A1P02461 AL672167.2-201ENST00000377164 879 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 MIR93-201ENST00000385024 80 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 HSPD1P16-201ENST00000402302 394 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.12□□□□□ -1.59
COL3A1P02461 AL513175.2-201ENST00000422071 443 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 FO393414.1-201ENST00000428697 1184 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.12□□□□□ -1.59
COL3A1P02461 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.12□□□□□ -1.59
COL3A1P02461 RPL6P5-201ENST00000445678 828 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 VN1R34P-201ENST00000447387 883 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 PRSS3P4-201ENST00000453323 162 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL3A1P02461 GAPDHP36-201ENST00000480688 918 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.12□□□□□ -1.59
COL3A1P02461 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.12□□□□□ -1.59
COL3A1P02461 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL3A1P02461 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.12□□□□□ -1.59
COL3A1P02461 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.12□□□□□ -1.59
COL3A1P02461 ZNF415P1-201ENST00000582279 1166 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 AC244505.7-201ENST00000599675 272 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.12□□□□□ -1.59
COL3A1P02461 AC011451.2-201ENST00000604303 598 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 AC124312.4-201ENST00000605533 310 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.12□□□□□ -1.59
COL3A1P02461 AC017083.3-201ENST00000609955 700 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 AL158163.2-201ENST00000619110 700 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.12□□□□□ -1.59
COL3A1P02461 AL160394.1-201ENST00000624765 724 ntBASIC5.12□□□□□ -1.59
COL3A1P02461 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.12□□□□□ -1.59
COL3A1P02461 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.12□□□□□ -1.59
COL3A1P02461 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL3A1P02461 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.11□□□□□ -1.59
COL3A1P02461 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.11□□□□□ -1.59
COL3A1P02461 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL3A1P02461 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
COL3A1P02461 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL3A1P02461 A2MP1-204ENST00000566278 4130 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms