Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SNRNP200O75643 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
SNRNP200O75643 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.02□□□□□ -1.93
SNRNP200O75643 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SNRNP200O75643 AL138878.1-201ENST00000405131 347 ntBASIC3.02□□□□□ -1.93
SNRNP200O75643 AC007899.1-201ENST00000412776 775 ntBASIC3.02□□□□□ -1.93
SNRNP200O75643 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.02□□□□□ -1.93
SNRNP200O75643 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.02□□□□□ -1.93
SNRNP200O75643 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.02□□□□□ -1.93
SNRNP200O75643 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.02□□□□□ -1.93
SNRNP200O75643 RNA5SP341-201ENST00000516261 117 ntBASIC3.02□□□□□ -1.93
SNRNP200O75643 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.02□□□□□ -1.93
SNRNP200O75643 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SNRNP200O75643 AC005242.1-201ENST00000585658 438 ntBASIC3.02□□□□□ -1.93
SNRNP200O75643 AC006539.2-201ENST00000601729 572 ntBASIC3.02□□□□□ -1.93
SNRNP200O75643 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.02□□□□□ -1.93
SNRNP200O75643 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
SNRNP200O75643 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SNRNP200O75643 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNRNP200O75643 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SNRNP200O75643 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNRNP200O75643 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNRNP200O75643 AL034379.1-201ENST00000423216 253 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 MTND4LP12-201ENST00000448237 295 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 AC243772.1-201ENST00000451620 410 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.01□□□□□ -1.93
SNRNP200O75643 FABP5P12-201ENST00000515543 389 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 OR4A2P-201ENST00000527276 913 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 NCAPGP2-201ENST00000557911 754 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 AC015911.5-201ENST00000587076 451 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.01□□□□□ -1.93
SNRNP200O75643 RLIMP2-201ENST00000427891 1563 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.01□□□□□ -1.93
SNRNP200O75643 RPL7P26-201ENST00000333817 754 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SNRNP200O75643 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.01□□□□□ -1.93
SNRNP200O75643 SNORA48.2-201ENST00000390926 124 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 RPL30P2-201ENST00000414021 291 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 FTH1P6-201ENST00000430768 320 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.01□□□□□ -1.93
SNRNP200O75643 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.01□□□□□ -1.93
SNRNP200O75643 HIGD1AP18-201ENST00000520730 278 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.01□□□□□ -1.93
SNRNP200O75643 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.01□□□□□ -1.93
SNRNP200O75643 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.01□□□□□ -1.93
SNRNP200O75643 OR6R2P-201ENST00000609216 300 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 AL356490.1-201ENST00000623079 479 ntBASIC3.01□□□□□ -1.93
SNRNP200O75643 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.01□□□□□ -1.93
SNRNP200O75643 AC007342.7-201ENST00000624610 2337 ntBASIC3□□□□□ -1.93
SNRNP200O75643 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3□□□□□ -1.93
SNRNP200O75643 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3□□□□□ -1.93
SNRNP200O75643 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SNRNP200O75643 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3□□□□□ -1.93
SNRNP200O75643 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNRNP200O75643 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNRNP200O75643 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNRNP200O75643 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3□□□□□ -1.93
SNRNP200O75643 AC112492.1-201ENST00000449607 712 ntBASIC3□□□□□ -1.93
SNRNP200O75643 CYCSP20-201ENST00000473154 315 ntBASIC3□□□□□ -1.93
SNRNP200O75643 RPS4XP13-201ENST00000483219 789 ntBASIC3□□□□□ -1.93
SNRNP200O75643 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3□□□□□ -1.93
SNRNP200O75643 MIR2276-201ENST00000516886 89 ntBASIC3□□□□□ -1.93
SNRNP200O75643 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3□□□□□ -1.93
SNRNP200O75643 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3□□□□□ -1.93
SNRNP200O75643 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3□□□□□ -1.93
SNRNP200O75643 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3□□□□□ -1.93
SNRNP200O75643 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3□□□□□ -1.93
SNRNP200O75643 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3□□□□□ -1.93
SNRNP200O75643 AL160281.1-201ENST00000605307 311 ntBASIC3□□□□□ -1.93
SNRNP200O75643 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNRNP200O75643 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNRNP200O75643 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SNRNP200O75643 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNRNP200O75643 SNORD56.3-201ENST00000363507 71 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 AC025750.2-201ENST00000442609 450 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.99□□□□□ -1.93
SNRNP200O75643 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.99□□□□□ -1.93
SNRNP200O75643 Vault.1-201ENST00000516474 102 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
SNRNP200O75643 MIR3200-201ENST00000580767 85 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.99□□□□□ -1.93
SNRNP200O75643 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.99□□□□□ -1.93
SNRNP200O75643 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.99□□□□□ -1.93
SNRNP200O75643 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.99□□□□□ -1.93
SNRNP200O75643 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.99□□□□□ -1.93
SNRNP200O75643 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SNRNP200O75643 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SNRNP200O75643 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNRNP200O75643 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNRNP200O75643 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.99□□□□□ -1.93
SNRNP200O75643 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SNRNP200O75643 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNRNP200O75643 RNU6-1320P-201ENST00000390838 107 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 RNU6-1269P-201ENST00000391139 107 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 RNA5SP239-201ENST00000410218 129 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.99□□□□□ -1.93
SNRNP200O75643 AL353678.1-201ENST00000422735 741 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 AL353597.2-202ENST00000434901 373 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 RPL23AP22-201ENST00000437556 453 ntBASIC2.99□□□□□ -1.93
SNRNP200O75643 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms