Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNORD66.1-201ENST00000391230 76 ntBASIC4.36□□□□□ -1.71
LDB2O43679 SNORA11F-201ENST00000408237 128 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.36□□□□□ -1.71
LDB2O43679 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.36□□□□□ -1.71
LDB2O43679 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.36□□□□□ -1.71
LDB2O43679 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.36□□□□□ -1.71
LDB2O43679 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.36□□□□□ -1.71
LDB2O43679 Z93242.1-201ENST00000427102 353 ntBASIC4.36□□□□□ -1.71
LDB2O43679 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.36□□□□□ -1.71
LDB2O43679 DYNLL1P7-201ENST00000429273 258 ntBASIC4.36□□□□□ -1.71
LDB2O43679 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 TMX2P1-201ENST00000436507 708 ntBASIC4.36□□□□□ -1.71
LDB2O43679 COX6CP18-201ENST00000448769 222 ntBASIC4.36□□□□□ -1.71
LDB2O43679 ABCF2P2-201ENST00000450549 296 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AC097262.1-201ENST00000452559 548 ntBASIC4.36□□□□□ -1.71
LDB2O43679 RPS27AP8-201ENST00000452665 445 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.36□□□□□ -1.71
LDB2O43679 AC005229.2-201ENST00000456995 399 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.36□□□□□ -1.71
LDB2O43679 SYPL1P1-201ENST00000473622 768 ntBASIC4.36□□□□□ -1.71
LDB2O43679 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 RAP1BP2-201ENST00000478270 544 ntBASIC4.36□□□□□ -1.71
LDB2O43679 RPS27P23-201ENST00000487608 251 ntBASIC4.36□□□□□ -1.71
LDB2O43679 RNU6-759P-201ENST00000516740 103 ntBASIC4.36□□□□□ -1.71
LDB2O43679 RNA5SP135-201ENST00000517019 125 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.36□□□□□ -1.71
LDB2O43679 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.36□□□□□ -1.71
LDB2O43679 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.36□□□□□ -1.71
LDB2O43679 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.36□□□□□ -1.71
LDB2O43679 AL352979.3-201ENST00000553515 247 ntBASIC4.36□□□□□ -1.71
LDB2O43679 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.36□□□□□ -1.71
LDB2O43679 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.36□□□□□ -1.71
LDB2O43679 PARP1P2-201ENST00000556806 195 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.36□□□□□ -1.71
LDB2O43679 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.36□□□□□ -1.71
LDB2O43679 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.36□□□□□ -1.71
LDB2O43679 OR4K7P-201ENST00000580232 945 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AL354984.3-201ENST00000604803 325 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AL356218.2-201ENST00000605264 187 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AC131235.4-201ENST00000609288 620 ntBASIC4.36□□□□□ -1.71
LDB2O43679 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AL021997.2-201ENST00000615674 271 ntBASIC4.36□□□□□ -1.71
LDB2O43679 uc_338.13-201ENST00000618243 179 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AC015908.5-201ENST00000623289 343 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AC019278.1-201ENST00000623516 479 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AC073530.2-201ENST00000623987 261 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AC116618.1-201ENST00000634617 774 ntBASIC4.36□□□□□ -1.71
LDB2O43679 AL592182.3-201ENST00000642132 3304 ntBASIC4.36□□□□□ -1.71
LDB2O43679 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.36□□□□□ -1.71
LDB2O43679 AC025031.4-201ENST00000621248 3271 ntBASIC4.36□□□□□ -1.71
LDB2O43679 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
LDB2O43679 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LDB2O43679 AC022031.1-201ENST00000585985 2593 ntBASIC4.35□□□□□ -1.71
LDB2O43679 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.35□□□□□ -1.71
LDB2O43679 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LDB2O43679 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LDB2O43679 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 RNU6-931P-201ENST00000363850 107 ntBASIC4.35□□□□□ -1.71
LDB2O43679 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.35□□□□□ -1.71
LDB2O43679 AL161909.1-201ENST00000397390 712 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AL583835.1-201ENST00000399570 407 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AL049693.1-201ENST00000402760 611 ntBASIC4.35□□□□□ -1.71
LDB2O43679 HNRNPDP2-201ENST00000406475 478 ntBASIC4.35□□□□□ -1.71
LDB2O43679 ELOCP19-201ENST00000411919 318 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AL161449.1-201ENST00000414531 1199 ntBASIC4.35□□□□□ -1.71
LDB2O43679 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 AL732292.1-201ENST00000426692 226 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC073335.1-201ENST00000427776 363 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 MTCO3P5-201ENST00000433620 714 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.35□□□□□ -1.71
LDB2O43679 THAP5P1-201ENST00000439089 262 ntBASIC4.35□□□□□ -1.71
LDB2O43679 MTND6P18-201ENST00000439477 513 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC079804.1-201ENST00000461922 436 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC092754.2-201ENST00000463506 460 ntBASIC4.35□□□□□ -1.71
LDB2O43679 RPL7P22-201ENST00000466005 733 ntBASIC4.35□□□□□ -1.71
LDB2O43679 OR2A20P-203ENST00000498397 1268 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC025674.1-201ENST00000507074 324 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 AC048346.1-201ENST00000510247 144 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 AC015795.1-201ENST00000513669 327 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC117532.1-201ENST00000514638 323 ntBASIC4.35□□□□□ -1.71
LDB2O43679 IGLVIV-65-201ENST00000517313 360 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms