Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.8□□□□□ -1.64
PHGDHO43175 AC004980.4-201ENST00000513375 203 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 RN7SKP277-201ENST00000516895 283 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
PHGDHO43175 IGLV2-28-201ENST00000520681 304 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.8□□□□□ -1.64
PHGDHO43175 AC092470.1-201ENST00000546187 132 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.8□□□□□ -1.64
PHGDHO43175 MIR3691-201ENST00000578066 90 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 RNF138P2-201ENST00000603490 592 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC007566.2-201ENST00000603642 413 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC122108.2-201ENST00000611946 526 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC025588.4-201ENST00000615802 908 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC009318.4-201ENST00000620496 486 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 CYP3A51P-201ENST00000633513 256 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.8□□□□□ -1.64
PHGDHO43175 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 AC135352.1-201ENST00000506173 1418 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.8□□□□□ -1.64
PHGDHO43175 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.79□□□□□ -1.64
PHGDHO43175 GDI2P1-201ENST00000429312 1336 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 KARSP3-201ENST00000571212 1504 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PHGDHO43175 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PHGDHO43175 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 RN7SKP224-201ENST00000364140 325 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.79□□□□□ -1.64
PHGDHO43175 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.79□□□□□ -1.64
PHGDHO43175 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.79□□□□□ -1.64
PHGDHO43175 ZNF885P-201ENST00000420174 1098 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 FABP7P2-201ENST00000429946 379 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AL365184.2-201ENST00000431139 435 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.79□□□□□ -1.64
PHGDHO43175 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.79□□□□□ -1.64
PHGDHO43175 TDGF1P1-201ENST00000445734 527 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 BMI1P1-201ENST00000445879 941 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AL589765.3-201ENST00000446084 462 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 EPS15P1-201ENST00000448836 336 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.79□□□□□ -1.64
PHGDHO43175 OR52J1P-201ENST00000450596 932 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 SNRPGP9-201ENST00000456025 225 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AC017015.1-201ENST00000477387 286 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC093767.1-201ENST00000504523 156 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.79□□□□□ -1.64
PHGDHO43175 MTND3P5-201ENST00000512798 333 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 PTP4A1P6-201ENST00000531034 478 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC022146.1-201ENST00000595307 847 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 YWHAQP7-201ENST00000603536 658 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 IMMP1LP1-201ENST00000605170 488 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AC010424.2-201ENST00000607594 443 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AL513477.2-201ENST00000607858 568 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.79□□□□□ -1.64
PHGDHO43175 AC098679.4-201ENST00000624241 654 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.79□□□□□ -1.64
PHGDHO43175 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PHGDHO43175 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 AL359922.3-201ENST00000624779 1670 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 AP001273.1-201ENST00000624493 3152 ntBASIC4.79□□□□□ -1.64
PHGDHO43175 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHGDHO43175 AL445487.1-201ENST00000415694 1580 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.78□□□□□ -1.64
PHGDHO43175 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.78□□□□□ -1.64
PHGDHO43175 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
PHGDHO43175 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHGDHO43175 RPL23AP57-201ENST00000332361 466 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 RNU1-83P-201ENST00000363426 164 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 RNU1-130P-201ENST00000363930 160 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 Y_RNA.194-201ENST00000363985 102 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHGDHO43175 SNORA70-201ENST00000384436 135 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 Y_RNA.553-201ENST00000384670 102 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 SNORD116-4-201ENST00000384733 96 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 ENSAP1-201ENST00000392855 326 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 MIR320C1-201ENST00000408566 88 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms