Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 HMGB1P10-201ENST00000395823 563 ntBASIC3.95□□□□□ -1.78
MSH4O15457 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
MSH4O15457 HMGB1P13-201ENST00000406019 642 ntBASIC3.95□□□□□ -1.78
MSH4O15457 RNU2-17P-201ENST00000410290 190 ntBASIC3.95□□□□□ -1.78
MSH4O15457 XKRYP4-201ENST00000414395 483 ntBASIC3.95□□□□□ -1.78
MSH4O15457 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.95□□□□□ -1.78
MSH4O15457 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.95□□□□□ -1.78
MSH4O15457 MRPS18BP2-201ENST00000434310 759 ntBASIC3.95□□□□□ -1.78
MSH4O15457 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.95□□□□□ -1.78
MSH4O15457 XKRYP5-201ENST00000449659 483 ntBASIC3.95□□□□□ -1.78
MSH4O15457 RPL23AP23-201ENST00000452590 471 ntBASIC3.95□□□□□ -1.78
MSH4O15457 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.95□□□□□ -1.78
MSH4O15457 AC023598.1-201ENST00000472521 361 ntBASIC3.95□□□□□ -1.78
MSH4O15457 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.95□□□□□ -1.78
MSH4O15457 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MSH4O15457 SETP14-201ENST00000497538 873 ntBASIC3.95□□□□□ -1.78
MSH4O15457 AC111193.1-201ENST00000504097 155 ntBASIC3.95□□□□□ -1.78
MSH4O15457 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.95□□□□□ -1.78
MSH4O15457 AC026333.2-201ENST00000542164 106 ntBASIC3.95□□□□□ -1.78
MSH4O15457 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.95□□□□□ -1.78
MSH4O15457 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MSH4O15457 AC115085.1-201ENST00000588924 229 ntBASIC3.95□□□□□ -1.78
MSH4O15457 BNIP3P22-201ENST00000593399 556 ntBASIC3.95□□□□□ -1.78
MSH4O15457 VN1R84P-201ENST00000593697 235 ntBASIC3.95□□□□□ -1.78
MSH4O15457 AC015967.1-201ENST00000619893 476 ntBASIC3.95□□□□□ -1.78
MSH4O15457 CR392039.4-201ENST00000624968 501 ntBASIC3.95□□□□□ -1.78
MSH4O15457 U6.105-201ENST00000637379 88 ntBASIC3.95□□□□□ -1.78
MSH4O15457 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
MSH4O15457 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MSH4O15457 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MSH4O15457 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.95□□□□□ -1.78
MSH4O15457 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
MSH4O15457 AL049781.1-201ENST00000623195 3585 ntBASIC3.94□□□□□ -1.78
MSH4O15457 FAM35DP-201ENST00000323387 2712 ntBASIC3.94□□□□□ -1.78
MSH4O15457 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MSH4O15457 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
MSH4O15457 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MSH4O15457 AL356489.2-201ENST00000566968 3528 ntBASIC3.94□□□□□ -1.78
MSH4O15457 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AL049555.1-201ENST00000562834 1933 ntBASIC3.94□□□□□ -1.78
MSH4O15457 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MSH4O15457 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.94□□□□□ -1.78
MSH4O15457 RNU2-65P-201ENST00000410162 185 ntBASIC3.94□□□□□ -1.78
MSH4O15457 LINC01347-201ENST00000417964 355 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.94□□□□□ -1.78
MSH4O15457 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.94□□□□□ -1.78
MSH4O15457 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.94□□□□□ -1.78
MSH4O15457 AL159987.2-201ENST00000432754 307 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AL353093.1-201ENST00000441292 436 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AL162388.1-201ENST00000450912 352 ntBASIC3.94□□□□□ -1.78
MSH4O15457 RPL26P28-201ENST00000451325 435 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AC007967.1-201ENST00000455422 1159 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AC108729.2-201ENST00000476543 840 ntBASIC3.94□□□□□ -1.78
MSH4O15457 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.94□□□□□ -1.78
MSH4O15457 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.94□□□□□ -1.78
MSH4O15457 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.94□□□□□ -1.78
MSH4O15457 DUXAP2-201ENST00000519198 589 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.94□□□□□ -1.78
MSH4O15457 AP000926.4-201ENST00000527351 454 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AP000619.3-201ENST00000535634 1127 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.94□□□□□ -1.78
MSH4O15457 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.94□□□□□ -1.78
MSH4O15457 AL121594.4-201ENST00000556211 1196 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AC067852.3-201ENST00000589177 561 ntBASIC3.94□□□□□ -1.78
MSH4O15457 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MSH4O15457 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.94□□□□□ -1.78
MSH4O15457 AC025946.2-201ENST00000603398 234 ntBASIC3.94□□□□□ -1.78
MSH4O15457 AL021368.1-201ENST00000607490 540 ntBASIC3.94□□□□□ -1.78
MSH4O15457 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MSH4O15457 MIR1264-201ENST00000616374 69 ntBASIC3.94□□□□□ -1.78
MSH4O15457 U6.48-201ENST00000618523 106 ntBASIC3.94□□□□□ -1.78
MSH4O15457 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MSH4O15457 AC068647.1-201ENST00000489539 2265 ntBASIC3.94□□□□□ -1.78
MSH4O15457 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
MSH4O15457 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
MSH4O15457 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
MSH4O15457 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.93□□□□□ -1.78
MSH4O15457 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
MSH4O15457 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
MSH4O15457 AC083899.2-201ENST00000423285 1376 ntBASIC3.93□□□□□ -1.78
MSH4O15457 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.93□□□□□ -1.78
MSH4O15457 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MSH4O15457 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MSH4O15457 AC074029.4-201ENST00000624796 1859 ntBASIC3.93□□□□□ -1.78
MSH4O15457 RNA5SP235-201ENST00000365411 114 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AL590290.1-201ENST00000405336 380 ntBASIC3.93□□□□□ -1.78
MSH4O15457 BX842559.1-201ENST00000419615 532 ntBASIC3.93□□□□□ -1.78
MSH4O15457 OSTCP5-201ENST00000425293 453 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AL138785.1-201ENST00000425821 331 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AC097499.1-201ENST00000444277 208 ntBASIC3.93□□□□□ -1.78
MSH4O15457 HMGB1P16-201ENST00000447155 540 ntBASIC3.93□□□□□ -1.78
MSH4O15457 PRDX3P3-201ENST00000447765 522 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AL133477.1-201ENST00000457472 514 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.93□□□□□ -1.78
MSH4O15457 AC010683.1-201ENST00000473673 378 ntBASIC3.93□□□□□ -1.78
MSH4O15457 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.93□□□□□ -1.78
MSH4O15457 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
MSH4O15457 AC010285.3-201ENST00000511668 676 ntBASIC3.93□□□□□ -1.78
MSH4O15457 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.93□□□□□ -1.78
MSH4O15457 SETP12-201ENST00000514068 805 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms