Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 snoU13.7-201ENST00000459220 104 ntBASIC3.64□□□□□ -1.83
LSM1O15116 AC078918.1-201ENST00000498515 228 ntBASIC3.64□□□□□ -1.83
LSM1O15116 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM1O15116 RN7SKP283-201ENST00000517197 270 ntBASIC3.64□□□□□ -1.83
LSM1O15116 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM1O15116 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM1O15116 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.64□□□□□ -1.83
LSM1O15116 AC037471.2-201ENST00000564941 598 ntBASIC3.64□□□□□ -1.83
LSM1O15116 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM1O15116 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.64□□□□□ -1.83
LSM1O15116 MIR4425-201ENST00000580572 84 ntBASIC3.64□□□□□ -1.83
LSM1O15116 AL591034.3-201ENST00000605511 685 ntBASIC3.64□□□□□ -1.83
LSM1O15116 SNORA51-201ENST00000606420 132 ntBASIC3.64□□□□□ -1.83
LSM1O15116 AC004775.1-201ENST00000607389 753 ntBASIC3.64□□□□□ -1.83
LSM1O15116 AF001550.2-201ENST00000636643 217 ntBASIC3.64□□□□□ -1.83
LSM1O15116 MTND5P3-201ENST00000438536 1800 ntBASIC3.64□□□□□ -1.83
LSM1O15116 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LSM1O15116 AC011978.2-201ENST00000569835 2054 ntBASIC3.64□□□□□ -1.83
LSM1O15116 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LSM1O15116 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LSM1O15116 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.64□□□□□ -1.83
LSM1O15116 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LSM1O15116 AC009501.3-201ENST00000605001 1352 ntBASIC3.63□□□□□ -1.83
LSM1O15116 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LSM1O15116 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM1O15116 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LSM1O15116 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM1O15116 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.63□□□□□ -1.83
LSM1O15116 RNA5SP189-201ENST00000364920 115 ntBASIC3.63□□□□□ -1.83
LSM1O15116 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.63□□□□□ -1.83
LSM1O15116 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.63□□□□□ -1.83
LSM1O15116 TAF9BP2-201ENST00000400856 499 ntBASIC3.63□□□□□ -1.83
LSM1O15116 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
LSM1O15116 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM1O15116 RNU2-17P-201ENST00000410290 190 ntBASIC3.63□□□□□ -1.83
LSM1O15116 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM1O15116 AC241520.1-201ENST00000422654 1099 ntBASIC3.63□□□□□ -1.83
LSM1O15116 AC069540.1-201ENST00000446320 988 ntBASIC3.63□□□□□ -1.83
LSM1O15116 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.63□□□□□ -1.83
LSM1O15116 AC239367.2-201ENST00000447309 705 ntBASIC3.63□□□□□ -1.83
LSM1O15116 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM1O15116 MTND5P8-201ENST00000449817 1083 ntBASIC3.63□□□□□ -1.83
LSM1O15116 RPL7P19-201ENST00000469948 618 ntBASIC3.63□□□□□ -1.83
LSM1O15116 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM1O15116 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.63□□□□□ -1.83
LSM1O15116 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.63□□□□□ -1.83
LSM1O15116 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM1O15116 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.63□□□□□ -1.83
LSM1O15116 AC008489.1-201ENST00000524271 483 ntBASIC3.63□□□□□ -1.83
LSM1O15116 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.63□□□□□ -1.83
LSM1O15116 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.63□□□□□ -1.83
LSM1O15116 OR4T1P-201ENST00000554933 911 ntBASIC3.63□□□□□ -1.83
LSM1O15116 CENPUP2-201ENST00000555897 1186 ntBASIC3.63□□□□□ -1.83
LSM1O15116 AL121576.1-201ENST00000556055 276 ntBASIC3.63□□□□□ -1.83
LSM1O15116 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.63□□□□□ -1.83
LSM1O15116 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.63□□□□□ -1.83
LSM1O15116 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM1O15116 SNORA62.6-201ENST00000606322 83 ntBASIC3.63□□□□□ -1.83
LSM1O15116 AL354760.1-201ENST00000608357 643 ntBASIC3.63□□□□□ -1.83
LSM1O15116 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM1O15116 AC005156.1-201ENST00000613371 573 ntBASIC3.63□□□□□ -1.83
LSM1O15116 MIR6716-201ENST00000613413 80 ntBASIC3.63□□□□□ -1.83
LSM1O15116 PLCE1P1-201ENST00000622094 305 ntBASIC3.63□□□□□ -1.83
LSM1O15116 AC090617.9-201ENST00000623751 147 ntBASIC3.63□□□□□ -1.83
LSM1O15116 AC112484.5-201ENST00000624189 228 ntBASIC3.63□□□□□ -1.83
LSM1O15116 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LSM1O15116 OR6C71P-202ENST00000641886 1107 ntBASIC3.63□□□□□ -1.83
LSM1O15116 MAPK10-362ENST00000641864 4484 ntBASIC3.63□□□□□ -1.83
LSM1O15116 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM1O15116 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM1O15116 CEP170P1-201ENST00000502249 4587 ntBASIC3.63□□□□□ -1.83
LSM1O15116 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.63□□□□□ -1.83
LSM1O15116 XPOTP1-201ENST00000443317 2398 ntBASIC3.62□□□□□ -1.83
LSM1O15116 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSM1O15116 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSM1O15116 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSM1O15116 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSM1O15116 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LSM1O15116 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSM1O15116 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.62□□□□□ -1.83
LSM1O15116 AL121657.1-201ENST00000327215 531 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AC126755.2-208ENST00000327792 462 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AC138969.1-213ENST00000331436 462 ntBASIC3.62□□□□□ -1.83
LSM1O15116 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LSM1O15116 MIR142-201ENST00000384835 87 ntBASIC3.62□□□□□ -1.83
LSM1O15116 RPS26P8-201ENST00000393490 348 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.62□□□□□ -1.83
LSM1O15116 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.62□□□□□ -1.83
LSM1O15116 RPS27AP12-201ENST00000429552 465 ntBASIC3.62□□□□□ -1.83
LSM1O15116 RPL37P1-201ENST00000432310 284 ntBASIC3.62□□□□□ -1.83
LSM1O15116 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.62□□□□□ -1.83
LSM1O15116 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 AC114878.1-201ENST00000441166 358 ntBASIC3.62□□□□□ -1.83
LSM1O15116 RPL23AP33-201ENST00000442301 452 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 Z77249.1-201ENST00000444622 1175 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.62□□□□□ -1.83
LSM1O15116 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.62□□□□□ -1.83
LSM1O15116 NPM1P49-201ENST00000448027 714 ntBASIC3.62□□□□□ -1.83
LSM1O15116 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms