Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CUX2O14529 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUX2O14529 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC5.73□□□□□ -1.49
CUX2O14529 U3.12-201ENST00000364498 214 ntBASIC5.73□□□□□ -1.49
CUX2O14529 AC013268.2-201ENST00000420753 337 ntBASIC5.73□□□□□ -1.49
CUX2O14529 AC093156.1-201ENST00000440382 670 ntBASIC5.73□□□□□ -1.49
CUX2O14529 RN7SL594P-201ENST00000470590 287 ntBASIC5.73□□□□□ -1.49
CUX2O14529 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.73□□□□□ -1.49
CUX2O14529 RPS4XP6-201ENST00000477670 797 ntBASIC5.73□□□□□ -1.49
CUX2O14529 AC114781.4-201ENST00000513707 639 ntBASIC5.73□□□□□ -1.49
CUX2O14529 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CUX2O14529 AC027290.2-201ENST00000623210 18662 ntBASIC5.73□□□□□ -1.49
CUX2O14529 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CUX2O14529 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CUX2O14529 AL672296.1-201ENST00000427780 2158 ntBASIC5.73□□□□□ -1.49
CUX2O14529 ELF2P3-201ENST00000445099 1506 ntBASIC5.72□□□□□ -1.49
CUX2O14529 RPS24P12-201ENST00000402084 394 ntBASIC5.72□□□□□ -1.49
CUX2O14529 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.72□□□□□ -1.49
CUX2O14529 IFNNP1-201ENST00000429219 553 ntBASIC5.72□□□□□ -1.49
CUX2O14529 RPS26P24-201ENST00000497656 331 ntBASIC5.72□□□□□ -1.49
CUX2O14529 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.72□□□□□ -1.49
CUX2O14529 RN7SKP132-201ENST00000516001 208 ntBASIC5.72□□□□□ -1.49
CUX2O14529 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.72□□□□□ -1.49
CUX2O14529 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.72□□□□□ -1.49
CUX2O14529 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CUX2O14529 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.71□□□□□ -1.49
CUX2O14529 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.71□□□□□ -1.49
CUX2O14529 AL513174.1-201ENST00000423182 629 ntBASIC5.71□□□□□ -1.49
CUX2O14529 MOB1AP1-201ENST00000430903 535 ntBASIC5.71□□□□□ -1.49
CUX2O14529 AC092809.1-201ENST00000441469 474 ntBASIC5.71□□□□□ -1.49
CUX2O14529 WASF1P1-201ENST00000447560 1131 ntBASIC5.71□□□□□ -1.49
CUX2O14529 AC008837.1-201ENST00000511513 412 ntBASIC5.71□□□□□ -1.49
CUX2O14529 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.49
CUX2O14529 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.71□□□□□ -1.49
CUX2O14529 KLKP1-201ENST00000595979 403 ntBASIC5.71□□□□□ -1.49
CUX2O14529 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.71□□□□□ -1.49
CUX2O14529 AL158827.2-201ENST00000602494 330 ntBASIC5.71□□□□□ -1.49
CUX2O14529 MIR486-1-201ENST00000612171 68 ntBASIC5.71□□□□□ -1.49
CUX2O14529 AL592295.2-201ENST00000612578 206 ntBASIC5.71□□□□□ -1.49
CUX2O14529 AL691447.3-201ENST00000635020 330 ntBASIC5.71□□□□□ -1.49
CUX2O14529 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CUX2O14529 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.71□□□□□ -1.5
CUX2O14529 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
CUX2O14529 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CUX2O14529 OR5BR1P-201ENST00000524992 1330 ntBASIC5.71□□□□□ -1.5
CUX2O14529 RNA5SP42-201ENST00000364278 115 ntBASIC5.71□□□□□ -1.5
CUX2O14529 AL079342.1-201ENST00000401460 267 ntBASIC5.71□□□□□ -1.5
CUX2O14529 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.71□□□□□ -1.5
CUX2O14529 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CUX2O14529 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.71□□□□□ -1.5
CUX2O14529 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.71□□□□□ -1.5
CUX2O14529 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.71□□□□□ -1.5
CUX2O14529 AC023598.1-201ENST00000472521 361 ntBASIC5.71□□□□□ -1.5
CUX2O14529 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.71□□□□□ -1.5
CUX2O14529 AC106734.1-201ENST00000568646 663 ntBASIC5.71□□□□□ -1.5
CUX2O14529 HMGB1P6-201ENST00000569046 646 ntBASIC5.71□□□□□ -1.5
CUX2O14529 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.71□□□□□ -1.5
CUX2O14529 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.71□□□□□ -1.5
CUX2O14529 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
CUX2O14529 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CUX2O14529 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CUX2O14529 SNORA7.4-201ENST00000384249 137 ntBASIC5.7□□□□□ -1.5
CUX2O14529 RNU6-482P-201ENST00000391068 107 ntBASIC5.7□□□□□ -1.5
CUX2O14529 RSL24D1P1-201ENST00000404972 493 ntBASIC5.7□□□□□ -1.5
CUX2O14529 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.7□□□□□ -1.5
CUX2O14529 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.7□□□□□ -1.5
CUX2O14529 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.7□□□□□ -1.5
CUX2O14529 AC084357.1-201ENST00000473404 255 ntBASIC5.7□□□□□ -1.5
CUX2O14529 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CUX2O14529 RNA5SP367-201ENST00000516557 118 ntBASIC5.7□□□□□ -1.5
CUX2O14529 AP006245.1-201ENST00000522549 120 ntBASIC5.7□□□□□ -1.5
CUX2O14529 AP000873.5-201ENST00000533906 236 ntBASIC5.7□□□□□ -1.5
CUX2O14529 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.7□□□□□ -1.5
CUX2O14529 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.7□□□□□ -1.5
CUX2O14529 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.7□□□□□ -1.5
CUX2O14529 AC105227.2-201ENST00000615075 605 ntBASIC5.7□□□□□ -1.5
CUX2O14529 AL353684.1-201ENST00000622677 1120 ntBASIC5.7□□□□□ -1.5
CUX2O14529 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CUX2O14529 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CUX2O14529 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CUX2O14529 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CUX2O14529 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CUX2O14529 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CUX2O14529 RNA5SP322-201ENST00000363617 119 ntBASIC5.69□□□□□ -1.5
CUX2O14529 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.69□□□□□ -1.5
CUX2O14529 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.69□□□□□ -1.5
CUX2O14529 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.69□□□□□ -1.5
CUX2O14529 IFNA11P-201ENST00000446352 526 ntBASIC5.69□□□□□ -1.5
CUX2O14529 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.69□□□□□ -1.5
CUX2O14529 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.69□□□□□ -1.5
CUX2O14529 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.69□□□□□ -1.5
CUX2O14529 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CUX2O14529 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CUX2O14529 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CUX2O14529 AL645568.2-201ENST00000432815 1337 ntBASIC5.68□□□□□ -1.5
CUX2O14529 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CUX2O14529 Z99755.1-201ENST00000414048 380 ntBASIC5.68□□□□□ -1.5
CUX2O14529 EEF1A1P41-201ENST00000414667 207 ntBASIC5.68□□□□□ -1.5
CUX2O14529 RPS20P1-201ENST00000434853 354 ntBASIC5.68□□□□□ -1.5
CUX2O14529 NECAP1P2-201ENST00000455668 727 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms